Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2896 ATGGGAGATTCCTATTTTACCAAGGAGGATAACCAAATTAGTGCTACCTTTGAACAAACTGAGGACAATGCTTGGTGCTACAATCTCAATCTATTTGAGATCATAGCTAAAGCAACACCACCTGGTGCTTTCATGTCACCATCTGAAATTGCTTCTAAATTGCCACCATCAACACAACACTCGGACTTGCCTAATAGGCTTGATCGAATGTTGTGTTTGCTTGCTAGTTATTCCGTTCTTACTTCTACTACTCGAACCATCGAGGATGGTGGCGCCGAGAGAGTTTACGGACTCTCAATGTTCGGAAAATACCTTGTTCCTGGTGAGAGTAGGGGCTACTTGGCTTCATTCACTACATTTCTATGTTATCCTGCTTTGTTACAAGTTTGGATGAACTTCAAGGAAGCCGTGGTTGATGAAGACATTGATTTGTCCAAGAACATTCATGGTGTGACAAAGTATGAATACATGGGAAAGGATAAAAAAATGAACCAAATTTTTAACAAGTCAATGGTTGATGTATGTGCAACAGAGATGAAAAGAATGCTTGAAATATACACTGGATTTGAAGGAATATCAACATTGGTTGATGTTGGAGGTGGAAGTGGACGAAATCTTGAAATGATTATATCCAAGTACCCATTAATTAAGGGAATTAATTTTGATCTGCCTCAGGCTGTATGTCATAATTGGTCAGATGAAAAATGCATAGAATTTTTAAGCAATTGTCACAAAGCTCTATCACCAAATGGAAAAGTGATTCTTGTGGAGTTCATATTGCCAGAAGAACCAAACACAACTGAAGAATCTAAACTTGTTTCAACTCTTGACAATCTCATGTTTATCACTGTTGGTGGAAGGGAAAGGACTGAGAAACAATATGAGAAATTGAGCAAACTCTCTGGATTTTCCAAATTTCAAGTTGCTTGCCGTGCTTTCAACAGCTTAGGAGTGATGGAATTTTATAAATGA 972 0.3807 MGDSYFTKEDNQISATFEQTEDNAWCYNLNLFEIIAKATPPGAFMSPSEIASKLPPSTQHSDLPNRLDRMLCLLASYSVLTSTTRTIEDGGAERVYGLSMFGKYLVPGESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLSKNIHGVTKYEYMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLEMIISKYPLIKGINFDLPQAVCHNWSDEKCIEFLSNCHKALSPNGKVILVEFILPEEPNTTEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2896 323 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 11 323 IPR016461 GO:0008168
Mal1g2896 323 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 28 226 - -
Mal1g2896 323 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 225 323 - -
Mal1g2896 323 PIRSF O-mtase 225 323 IPR016461 GO:0008168
Mal1g2896 323 PIRSF O-mtase 23 227 IPR016461 GO:0008168
Mal1g2896 323 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 320 IPR029063 -
Mal1g2896 323 SUPERFAMILY "Winged helix" DNA-binding domain 25 109 IPR036390 -
Mal1g2896 323 Pfam Dimerisation domain 25 75 IPR012967 GO:0046983
Mal1g2896 323 PANTHER O-METHYLTRANSFERASE 28 226 IPR016461 GO:0008168
Mal1g2896 323 PANTHER O-METHYLTRANSFERASE 225 323 IPR016461 GO:0008168
Mal1g2896 323 Gene3D - 24 144 IPR036388 -
Mal1g2896 323 Pfam O-methyltransferase domain 226 304 IPR001077 GO:0008171
Mal1g2896 323 Gene3D Vaccinia Virus protein VP39 227 323 IPR029063 -
Mal1g2896 323 Gene3D Vaccinia Virus protein VP39 153 226 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2896 Mal-Chr1 41423366 41428445 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2896 29 313 Monolignol Biosynthesis Gene Families AT5G54160 42.587 4.15e-81 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2896 - - ag:AAB48059 585.104