Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2894 ATGAACATGCTCAGGTATGAATACACAACCACTTTCATACTCTTGTTTTTGTTCTATCCTATGGTTTTGTCTTTGCTGTCTCAAAACCAAACAGAAACCATGAACACTCTTTCCAATCTTCTTAACATCCCTGGTTGGAATACAACCAATCCATGTTCATGGAAAGGTGTCACTTGTGACCTTACCAATTCATCTGTCATCAAAATTGTCCTATCTGGTTCTTCTCTCAATTCACAGTCTCTTCCTTCTCTTTGCCAAATTGAAACTTTGCAGCACCTTGATGTTTCTAATAACCATCTGAGCTCTATCCCTGATGGGTTCATTTCTGCATGTGGAAAGATTGAGAGCTTAAAGCTTTTGAATTTCAGTGAAAATGTGATAAGTGGTGTTTTGCCAACTTTTCATGGTTTTAGTGGACTAGAATCACTTGATATGTCTTCCAATAATTTGCGAGGAACCATTGACATGCAGTTGGATGGAATGGTTAGTCTCAAATTTCTTAATCTCAATAACAATAACTTCACTGGGAAAATTCCTACTAAACTTGGAAGATCCATGGTTTTGGAGAAGCTTGTGCTTTCAAACAATGGTTTTCAAGGAACAATCCCTGATCAAATTTTGAGCTACAAAAATTTGACTTTGATTGATTTTCAGGTAAATAAACTTTCAGGGTCTATTCCTTTAGATATTGGAAATCTTTCCAAATTGGATACTTTGAGTCTTTCCTCTAATAGACTAGGTGGTAAAATCCCAATGTCACTCATGAGTATCACAACACTAGTAAGATTTGCAGCTAATCTAAATAATTTCACTGGTGCTGTTCCTCTTGGAATTACAAAATTTCTTAAGAATTTGGATCTTAGTTATAATAATTTATCTGAGTCCATTCCAGAAGATCTTTTATCTCCATCACATATAGTGCTAGTAGATTTGTCCAATAACATGTTACAAGGGCCTGTACCTAGAAATATTTCTCCTAGTTTAGTCAGGTTGAGGTTGGGGGGAAATTTCTTGACAGGAGAGGTTCCTTCGGGTATTTGCGAAGAAGCCGAACATGGTTTGACATATATGGAACTGGAAAATAATCAGTTGACAGGTTTGATACCACCTGGATTAAGTTCTTGTAAGAAATTGGCCTTGTTGAATTTAGCTGATAACCAATTGACTGGTGCATTGCCACCAGAACTTGGCAATCTTCGCAGTCTTCAAGTCTTGAAGCTTCAAATGAACAAGCTTAATGGTACTATCCCAATTCAAATTTCCAAACTTCCAAGGTTGTCTTCCTTGAATTTGAGCCATAATTCTCTAGATGGACCAATTCCATCTGATATGTCAAACAACCTTACATTCCTTTACTTGCAAGGGAACAATCTCAACGGGTCTATACCGCCGTCCATTGGAAACTTGAAAAATCTTTTAGAAGTCCAACTTGGAGAAAATCAGCTAAGTGGCCTCATTCCAGAAATGCCTTTGAATCTACAGATTGCATTGAATGTCAGTAGCAATCACTTTAGTGGAAATATTCCTACAAGTTTCGGAGATTTGGTTAACCTAGAAATTTTGGATCTCTCAAATAACAACTTCTCCGGTGACATTCCTCAATCTTTAACTAAAATGTCTGCATTGACACAGTTGAAACTTTCAAACAATCGTCTATCAGGTGTCCTTCCATCATTTGGTCCGTATGTTAAAGTTGATATAGAAGGAACCAATGTCAAGAACAATAGTAATCTCTCACCCAACAATTCTCCAGTAGCAGAAAAGAAAGGGAAATCTGTTGTTGCCGCTGTTTTCATTGCAATTGCTGCTGCTATTTTTGTGGTTGGCATGGTCACCCTGCTGGTTGTATTGATCTCACGACACTATTGCAAGGTCAACGATGAACGGGTACAGTCAAGTGAAGGTGAAAATCTTGACCTTCCTCAGGTCATCCAGAGTAATTTGTCAACACCAAATGGAATCCACAGATCAAACATTGATTTCTCCAAGGCCATGGAAGCTGTTGCTGAAACGTCAAACATAACTCTAAAAACCAAGTTTTCGACATACTATAAGGCTGTTATGCCATCTGGCTCAATCTATTTTGCCAAGAAGCTGAACTGGTGTGACAAGATATTTCCAGTGAGTAGTGTTGATAAATTTGGGAAAGAGTTGGATGCTTTGGCAAAGTTGAACAATTCAAATGTGATGATTCCTCTAGGATACATCGTGTCCACTAACAATGCTTATACATTATACGAGTTTCTATCGAATGGCTCTCTCTTCGATGTGCTTCATGGAAGCACGGAAAACTCTTTAGATTGGGCTAGCAGATATAGTATAGCTGTTGGTGTGTCTCAAGGTCTCTCTTTTCTGCATGGATTTGCCTCTGGTCCAATACTTCTCCTTGATTTGTCAAGTAAAAGTATTATGCTGAAATCACTCAAGGAGCCTGTAGTTGGTGATATTGAACACTACAAGGTGATTGATCCTTCAAAGAGTACTGGGAGTTTTTCTGCAGTTGCTGGTTCTGTTGGTTACATTCCTCCAGAATATGCATACACAATGAGAGTAACAATGGCAGGGAATGTGTATAGCTTTGGGGTCATTCTACTAGAATTGCTAACAGGCAGACCTGCAGTGACCGAGGGAACTGAATTGGTGAAGTGGGTTTTGCGTAATTCAAGAAATCATGATTACATTCTTGATTTGAATGTTAGTAGAACATCACAGGCTGTTAGAAACCAAATGCTTGCAATTCTGGAGATTGCTCTTGTTTGTGTAAGCACATCCCCTGAAGCAAGACCAAAGATGAAGACTGTGTTAAGAATGTTGCTGAATGCCAGATAG 2829 0.3846 MNMLRYEYTTTFILLFLFYPMVLSLLSQNQTETMNTLSNLLNIPGWNTTNPCSWKGVTCDLTNSSVIKIVLSGSSLNSQSLPSLCQIETLQHLDVSNNHLSSIPDGFISACGKIESLKLLNFSENVISGVLPTFHGFSGLESLDMSSNNLRGTIDMQLDGMVSLKFLNLNNNNFTGKIPTKLGRSMVLEKLVLSNNGFQGTIPDQILSYKNLTLIDFQVNKLSGSIPLDIGNLSKLDTLSLSSNRLGGKIPMSLMSITTLVRFAANLNNFTGAVPLGITKFLKNLDLSYNNLSESIPEDLLSPSHIVLVDLSNNMLQGPVPRNISPSLVRLRLGGNFLTGEVPSGICEEAEHGLTYMELENNQLTGLIPPGLSSCKKLALLNLADNQLTGALPPELGNLRSLQVLKLQMNKLNGTIPIQISKLPRLSSLNLSHNSLDGPIPSDMSNNLTFLYLQGNNLNGSIPPSIGNLKNLLEVQLGENQLSGLIPEMPLNLQIALNVSSNHFSGNIPTSFGDLVNLEILDLSNNNFSGDIPQSLTKMSALTQLKLSNNRLSGVLPSFGPYVKVDIEGTNVKNNSNLSPNNSPVAEKKGKSVVAAVFIAIAAAIFVVGMVTLLVVLISRHYCKVNDERVQSSEGENLDLPQVIQSNLSTPNGIHRSNIDFSKAMEAVAETSNITLKTKFSTYYKAVMPSGSIYFAKKLNWCDKIFPVSSVDKFGKELDALAKLNNSNVMIPLGYIVSTNNAYTLYEFLSNGSLFDVLHGSTENSLDWASRYSIAVGVSQGLSFLHGFASGPILLLDLSSKSIMLKSLKEPVVGDIEHYKVIDPSKSTGSFSAVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGRPAVTEGTELVKWVLRNSRNHDYILDLNVSRTSQAVRNQMLAILEIALVCVSTSPEARPKMKTVLRMLLNAR* 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2894 942 SUPERFAMILY RNI-like 256 554 - -
Mal1g2894 942 PANTHER F12K21.25 11 939 - -
Mal1g2894 942 SMART LRR_typ_2 279 303 IPR003591 -
Mal1g2894 942 SMART LRR_typ_2 515 538 IPR003591 -
Mal1g2894 942 SMART LRR_typ_2 423 447 IPR003591 -
Mal1g2894 942 SMART LRR_typ_2 161 185 IPR003591 -
Mal1g2894 942 SMART LRR_typ_2 87 110 IPR003591 -
Mal1g2894 942 SMART LRR_typ_2 539 561 IPR003591 -
Mal1g2894 942 SMART LRR_typ_2 469 492 IPR003591 -
Mal1g2894 942 Gene3D Ribonuclease Inhibitor 23 182 IPR032675 -
Mal1g2894 942 Gene3D Ribonuclease Inhibitor 183 272 IPR032675 -
Mal1g2894 942 ProSiteProfiles Leucine-rich repeat profile. 89 110 IPR001611 GO:0005515
Mal1g2894 942 Pfam Protein tyrosine and serine/threonine kinase 711 938 IPR001245 GO:0004672|GO:0006468
Mal1g2894 942 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 11 939 - -
Mal1g2894 942 SUPERFAMILY L domain-like 49 343 - -
Mal1g2894 942 Gene3D Transferase(Phosphotransferase) domain 1 749 942 - -
Mal1g2894 942 SUPERFAMILY Protein kinase-like (PK-like) 680 938 IPR011009 -
Mal1g2894 942 Gene3D Phosphorylase Kinase; domain 1 646 748 - -
Mal1g2894 942 Pfam Leucine rich repeat N-terminal domain 42 60 IPR013210 -
Mal1g2894 942 Gene3D Ribonuclease Inhibitor 493 587 IPR032675 -
Mal1g2894 942 Gene3D Ribonuclease Inhibitor 273 492 IPR032675 -
Mal1g2894 942 ProSiteProfiles Protein kinase domain profile. 669 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g2894 942 Pfam Leucine rich repeat 89 150 IPR001611 GO:0005515
Mal1g2894 942 Pfam Leucine rich repeat 497 552 IPR001611 GO:0005515
Mal1g2894 942 PRINTS Leucine-rich repeat signature 90 103 - -
Mal1g2894 942 PRINTS Leucine-rich repeat signature 423 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2894 Mal-Chr1 41386081 41389304 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2894 138 942 Receptor kinase-like Gene Family AT2G41820 38.737 1.44e-148 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal1g2894 PK_Tyr_Ser-Thr 2.6e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2894 - - mtr:MTR_1g096260 1253.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2894 1 41386081 41389304 Mal1g2894 1 41386081 41389304 ECH