Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2889 ATGGAAGATTCAGAGGAAGATGAGCTTCTGAATCTTAGCCTTTCAGTTAATAGAGAAAGAAAAAACAAAGGAAAAATCATCACAAGTAGTACTAATAGAAACTCTTTTGAAGGCTATGAAGGAAAAATCTTTCACCTTCTTCAAATGAGAGAACAAATGCTAAGAAAAAGCACTCTCAACATTGAAGATTCAAATGGTCTTCCATTGATTCACTTACTTCTTACAACAGCAACTTCCGTCGATGAAAACAACTTCGATTCATCTCTCGAAAACCTAACCGATCTTTACCAAATAGTTTCGCTCACCGGTGATTCAGTTCAACGAGTTGTTGCCTATTTCACCGATGGTTTAACCGCGAAACTCCTCACAAAAAAATCACCATTCTATGAAATGTTGATGGAAGAACCAACAATAGACGAAGAGTTTCTCGCATTTACAGATCTCTACAGAGTTTCACCGTATTACCAATTCGCTCATTTCACCGCAAATCAAGCTATCTTAGAAGCCTTTGAAAAAGAAGAAGAGAAAAATAACCGTTCAATTCATGTTATTGATTTTGATGTTTCCTACGGTTTTCAATGGCCTTCATTGATTCAATCACTTTCAGAAAAAGCTACAAGTGGAAACAGAATCTCATTCAGATTAACCGGTTTTGGTAAGAATTTAAAAGAACTTCAAGAAACTGAATCTAGGTTAGTTAGTTTCTCAAAAGGTTTTAGTAACATTGTTTTTGAGTTTCAAGGTTTGTTAAGAGGTTCAAGAGTGATTAATTTAAGGAAGAAGAAAAATGAAACTGTGGCAGTTAATTTAGTTTCTTATTTAAACAAATTAAGTTGTTTATTGAAAATAACTGACACATTGGGATTTGTTCATTCTCTTAACCCTTCTATTGTTGTGATTGTTGAACAAGAAGGTAGTAAAAATCCTTCTAGAACCTTCTTATCAAGGTTCACAGACACGTTGCATTATTTTGCAGCTATGTTTGATTCACTTGATGATTGTTTACCTCTTGAGAGTATTGAGAGGTTAAGAATTGAGAAGAAGGTTTTTGGAAAAGAGATTAAAAGCATGCTTAACAATTATGATGATGTGGAAAGTGGTGTTGATTGTGCAAAATATGAAAAAATGGAAACATGGAAAAGTAGAATGGAGAATCATGGATTTGTTGGTGTGAAAATGAGTTCAAAGTGTTTGATACAAGCTAAATTGTTGCTTAAGATGAGAACACATTATTGTCCACTTCAATTTGAGGAAGAAGGTGGTGGTGGTGGTTTCAGGGTTTCAGAAAGAGATGATGGAAAAGCTATCTCTTTAGGATGGCAAAATAGGTTTTTGCTAACTGTTTCAACATGGCAATCACTTTGA 1365 0.3429 MEDSEEDELLNLSLSVNRERKNKGKIITSSTNRNSFEGYEGKIFHLLQMREQMLRKSTLNIEDSNGLPLIHLLLTTATSVDENNFDSSLENLTDLYQIVSLTGDSVQRVVAYFTDGLTAKLLTKKSPFYEMLMEEPTIDEEFLAFTDLYRVSPYYQFAHFTANQAILEAFEKEEEKNNRSIHVIDFDVSYGFQWPSLIQSLSEKATSGNRISFRLTGFGKNLKELQETESRLVSFSKGFSNIVFEFQGLLRGSRVINLRKKKNETVAVNLVSYLNKLSCLLKITDTLGFVHSLNPSIVVIVEQEGSKNPSRTFLSRFTDTLHYFAAMFDSLDDCLPLESIERLRIEKKVFGKEIKSMLNNYDDVESGVDCAKYEKMETWKSRMENHGFVGVKMSSKCLIQAKLLLKMRTHYCPLQFEEEGGGGGFRVSERDDGKAISLGWQNRFLLTVSTWQSL* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2889 454 ProSiteProfiles GRAS family profile. 60 452 IPR005202 -
Mal1g2889 454 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 452 IPR005202 -
Mal1g2889 454 Pfam GRAS domain family 69 452 IPR005202 -
Mal1g2889 454 PANTHER OSJNBA0084A10.13 PROTEIN 8 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2889 Mal-Chr1 41321418 41322782 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2889 77 451 GRAS Transcription Factor Family AT3G54220 33.763 1.43e-53 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal1g2889 GRAS 5.4e-88 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2889 - - gmx:100809458 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2889 1 41321418 41322782 Mal1g2889 1 41321418 41322782 ECH