Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2877 ATGGAACACAAAATGAAAACCACGACTTCTCCTCCTCATCTACCAATCCCAATTCATGTTCCCACTCACACCATGCTATCAAACTCTCCCCCATCTTCATCTTCTTCACCTCCTTTACAATCTCCAACACCTTTCCCTTCACCTGCTTCTCAATATTCTCATCCCTCTGCCGCTCCTCAACCACCATCTCCTCCACCACCAATTATTGTTAGCCCTTGTGCTGCCTGCAAGATTCTCCGTCGCAGGTGTGTTGAAAAGTGTGTGTTAGCTCCCTATTTTCCTCCAACTGATCCACTCAAGTTCACCATTGCTCATAGAGTATTTGGAGCTAGCAACATCATTAAGTTCTTGCAGGAACTACCTGAACCTCAGAGAGCAGATGCAGTGAGTAGTATGGTGTATGAAGCAAATGCTAGGATAAGGGACCCAGTTTATGGGTGTGCAGGTGCAATATGTCAGCTTCAAAAACAAGTTAGTGAGCTACAAACACAGTTAGCCAAAGCACAAGCTGAGCTAGTGAACATGCATTGTCAACAAGCAAATTTAGTGGCACTAATTTGCATGGAAATGAGTACTCAGTCATCACCAGATCATAACATGATAATTAATCAGCCTCAACCTCATGTTGATATGAGTTGCTTCTTAGAGGACAACAATTTTGGGTCTGCTTGGGAGCCTCTTTGGACATGA 690 0.4391 MEHKMKTTTSPPHLPIPIHVPTHTMLSNSPPSSSSSPPLQSPTPFPSPASQYSHPSAAPQPPSPPPPIIVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPEPQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQTQLAKAQAELVNMHCQQANLVALICMEMSTQSSPDHNMIINQPQPHVDMSCFLEDNNFGSAWEPLWT* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2877 229 Coils Coil 151 178 - -
Mal1g2877 229 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 59 226 - -
Mal1g2877 229 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 59 226 - -
Mal1g2877 229 MobiDBLite consensus disorder prediction 35 64 - -
Mal1g2877 229 Pfam Lateral organ boundaries (LOB) domain 72 169 IPR004883 -
Mal1g2877 229 ProSiteProfiles LOB domain profile. 71 172 IPR004883 -
Mal1g2877 229 MobiDBLite consensus disorder prediction 1 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2877 Mal-Chr1 41085916 41087456 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2877 68 229 AS2 family AT1G07900 66.279 4.58e-75 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal1g2877 LOB 6.9e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2877 - - gmx:100806667 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2877 1 41085916 41087456 Mal1g2877 1 41085916 41087456 ECH