Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2872 ATGGGGAGGAAAGGAAGTTGGTTTTCTGCGGTGAAGAAAATTTTCATTTCTGATTCTAAAAAAGATCAGAAACATCTTCATAAGTCGAATTCGAAGTTAACATGTTTTGGACATCAACATCACCATCATCATTATGAGGATGCTGAGTGGAAAACTGGAGGAGTAGCACCAATAACTGTTGTTCCTCTTCCATCTCTTCCTCCAAAAAAAGATGTTGTTAAACCAAAAAAAATTAAGAAAGAGGATGAGCAGGACAAACAAGCTTTTTCATTGATTCTAGCCACAGCTGTTGCTACTGGCGCGGCCGTTGCTGCTGCTAAGAATGCTGTTCAGGCTGCTACAGAGGCCGCTCGTGTCACAAGTGTTCCTCTTTGTTACGTTGGAAAAACTAATGAAGAAATAGCAGCTATCAAAATTCAATCCGCCTACCGCGGATATGTGGCAAGGAGGAAATTGCGTGGATTGAGAGGTTTAGCGAGGTTGAAAGCATTGGTAAAAGGGCAATCAGTTCAGCGACAAGCGGCTACCACATTACAATGCATGCAAACTCTTTCGCGATTGCAGTCTCAAGTTAGCGCGAGGAAGATCAGAATGTCTGAGGAGAATCAATCTTTTCAACGTCAATTGCAGCAGAAACGTGAAAAGGAACTTGACAAGTTACAAGCTGCTCCTATTGGAGAAAAATGGGATTATAGTTCACAATCAAAGGAGCAAATCCAAGCAAAATTGTTGCACAGACAAATTGCTGCTATGAGAAGAGAGAAGGCTTTGGCATATGCATCAACACATCAGCAAACATGGAGGAACTCTTCAAAACCTACAGATGCCACAATTATGGATTCAAACAATCCCCATTGGGGATGGAATTGGCTTGATAGATGGATGGCTTCAAGGCCATGGGAAGGACAAAACAATAAGGATCAAAAGAATCATAGATCGGCAAAAGGTGCCTTAAGCCATACAATGTCAGTTGGAGAAATCTCCAAATTATATTCTCTAAGAGATCAAAATAAAGATAATAAAAATTCCCCTGCAAGCCAAAAAGCAAATAATCCAAATCAAGCTTCAAAGGCAATAACTTCAACAACTACTAAAGGAAAAGCAAAGACAACATCATCAAGTCCAAGAGTTGGTTCTTGGGGTAGTGATAGTGACTCAAAAACCATATTCAACAAAAATTCAGAAAGTAATCGCCGACATAGCATTGCGGTATCTCCGGTGAAAGAGGATGGAAGCCTTGTAAACACACCTGCAAAGGTTAAAACTAAAGTGCAAGTAAAGAAGCAGCTTTCTTTCACAGCTTCTCAATCTGGTTCTAGAAGGCATTCTGTTCCATCTAAGATGGGAATGAATTCTAATAAGAATGTTGCTGCTACTATCCCTGAAGTGAAAGTGAAAGTGAGAAATGGAGGGAGCAGGTAG 1422 0.4051 MGRKGSWFSAVKKIFISDSKKDQKHLHKSNSKLTCFGHQHHHHHYEDAEWKTGGVAPITVVPLPSLPPKKDVVKPKKIKKEDEQDKQAFSLILATAVATGAAVAAAKNAVQAATEAARVTSVPLCYVGKTNEEIAAIKIQSAYRGYVARRKLRGLRGLARLKALVKGQSVQRQAATTLQCMQTLSRLQSQVSARKIRMSEENQSFQRQLQQKREKELDKLQAAPIGEKWDYSSQSKEQIQAKLLHRQIAAMRREKALAYASTHQQTWRNSSKPTDATIMDSNNPHWGWNWLDRWMASRPWEGQNNKDQKNHRSAKGALSHTMSVGEISKLYSLRDQNKDNKNSPASQKANNPNQASKAITSTTTKGKAKTTSSSPRVGSWGSDSDSKTIFNKNSESNRRHSIAVSPVKEDGSLVNTPAKVKTKVQVKKQLSFTASQSGSRRHSVPSKMGMNSNKNVAATIPEVKVKVRNGGSR* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2872 473 ProSiteProfiles IQ motif profile. 132 160 IPR000048 GO:0005515
Mal1g2872 473 MobiDBLite consensus disorder prediction 433 458 - -
Mal1g2872 473 MobiDBLite consensus disorder prediction 337 400 - -
Mal1g2872 473 Coils Coil 195 215 - -
Mal1g2872 473 MobiDBLite consensus disorder prediction 433 459 - -
Mal1g2872 473 Pfam IQ calmodulin-binding motif 135 153 IPR000048 GO:0005515
Mal1g2872 473 MobiDBLite consensus disorder prediction 336 400 - -
Mal1g2872 473 MobiDBLite consensus disorder prediction 262 282 - -
Mal1g2872 473 Gene3D - 131 195 - -
Mal1g2872 473 PANTHER IQ-DOMAIN 5-RELATED 1 465 - -
Mal1g2872 473 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 465 - -
Mal1g2872 473 MobiDBLite consensus disorder prediction 300 321 - -
Mal1g2872 473 SMART iq_5 131 153 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2872 Mal-Chr1 41040990 41043137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2872 1 418 IQD Protein Family AT5G03040 41.204 3.01e-87 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2872 - - gmx:100807725 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2872 1 41040990 41043137 Mal1g2872 1 41040990 41043137 ECH