Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2869 ATGATCACTGGGACGTCCGAAGCTGATTGTGCTCTTCTTATCCTTGATTCCTCTATTGGTGCTTTTGAAGGTAGCTTTTCCAGGGATGGCCTGACCCGGGAACATATTCTCCTTGCTTTCACTCTTGGTGTGAAGCAAATGATCTGCTGCTGTAACAAGGTAGACAAAATTCCATTTGTTCCTATCTCTGGTTTTGAGGGAGATAACATGATCGAGCGCTCTACAAACCTTGACTGGTACAAGGGTCCAACCCTTCTTGAGGCACTCGACGAAATCAATGAGCCTAAGAGGCCATCATACAAGCCCCTCCGACTACCACTTCAGGATGTCTACAAGATTGGAGGAATTGGAACTGTGGCCGTGGGACGTGTTGAGACTGGTGTCTTGAAACCTGGAATGGTTGTCACTTTTGCACCAATTGGACTGACAACTGAAGATCTCAAGCGTGGCTATGTTGCCTCTAACTCCAAGGATGACCCAGCCAAGGAGGCCGCTAGCTTTGCATCTCAAATTGTCATCATGAATCACCCTGGCAAGATTGAAAATGGCTATACACCTGTTCTTGACTGCCATACCTCCCACATTGCTGTCAAGTTTGCTGACCTTGTTACCAAGATTGATAGGCGTACTGGTAAGGAGAAGGAGAAGAAGCCGAGATTCCTGATGAATGGTGATTCTGGTATTATTAAGATGATTCCCACCGAGCCCATGGTGGTTGAAGCTTTCTCTGAATATCCTCCACTCGGCCGTTTTACTGCCAGGGACGTGAATAAAACTGTGGATGTTGGTGTCATCAAGGCTGTGGACAAGAAGGATCCCAGTGGAGGACTTTAG 834 0.4712 MITGTSEADCALLILDSSIGAFEGSFSRDGLTREHILLAFTLGVKQMICCCNKVDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDEINEPKRPSYKPLRLPLQDVYKIGGIGTVAVGRVETGVLKPGMVVTFAPIGLTTEDLKRGYVASNSKDDPAKEAASFASQIVIMNHPGKIENGYTPVLDCHTSHIAVKFADLVTKIDRRTGKEKEKKPRFLMNGDSGIIKMIPTEPMVVEAFSEYPPLGRFTARDVNKTVDVGVIKAVDKKDPSGGL* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2869 277 Gene3D Translation factors 100 164 - -
Mal1g2869 277 Pfam Elongation factor Tu GTP binding domain 1 57 IPR000795 GO:0003924|GO:0005525
Mal1g2869 277 Gene3D - 57 93 IPR027417 -
Mal1g2869 277 Gene3D - 1 56 IPR027417 -
Mal1g2869 277 PANTHER ELONGATION FACTOR 1-ALPHA 1 55 - -
Mal1g2869 277 PANTHER ELONGATION FACTOR 1-ALPHA 146 275 - -
Mal1g2869 277 Pfam Elongation factor Tu C-terminal domain 160 268 IPR004160 -
Mal1g2869 277 Gene3D Translation factors 165 269 - -
Mal1g2869 277 SUPERFAMILY Translation proteins 101 155 IPR009000 -
Mal1g2869 277 CDD EF1_alpha_III 162 265 - -
Mal1g2869 277 PANTHER TRANSLATION FACTOR 55 145 - -
Mal1g2869 277 PANTHER TRANSLATION FACTOR 146 275 - -
Mal1g2869 277 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 118 IPR027417 -
Mal1g2869 277 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 165 268 IPR009001 -
Mal1g2869 277 PANTHER ELONGATION FACTOR 1-ALPHA 55 145 - -
Mal1g2869 277 PANTHER TRANSLATION FACTOR 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2869 Mal-Chr1 41016231 41017521 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2869 1 276 Eukaryotic Initiation Factors Gene Family AT5G60390 66.964 1.48e-160 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2869 K03231 - thj:104810843 451.44