Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2865 ATGGATGCCACTACACCCAAGTACTCCAAGGGTAGGTACGATGAAATTGTGAAGGAAGTTTCATTATATTTGAAGAAGGTTGGCTATAACCCAGACAAAATTCCTTTTGTTCCCATCTCTGGTTTTGAGGGAGATAACATGATTGAGCGCTCTACCAATCTTGACTGGTACAAGGGTCCAACACTTCTTGAGGCCCTTGATCAAATCAACGAGCCTAAGAGGCCTTCAGACAAGCCCCTCCGACTACCACTTCAGGATGTCTACAAGATTGGAGGAATTGAAACTGTGCCTGTGGGACGTGTTGAGACTGGTGTCTTGATACCTGGAATGGTGGTCACTTTCGCACCAACTGGACTGACAACTGAAGTCAAGTCTGCCCTTCCTGGTGACAATGTGGGATTTAATGTTAAGAATGTTGCTGTTAAGGATCTCAAGCGTGGTTATGTTGCCTCAAACTCCAAGGATGACCCAGCCAAGGAGGCCGCTAACTTTACATCTCACGTCATCATTCTGAATCACCCTGGCCAGATTGGAAACGGCTATGCCCCTGTTCTTGACTGCCACACCTCCCACATTGCTGTCAAATTTGCTGAGCTTGTTACCAAGATTGACAGGCGTTCCGGAAAGGAGATTGAGAAGGAGCCCAAATTCCTGAAGAATGGTGATGCTGGTATTATTAAGATGATTCCCACCAAGCCCGTGGTGGTTGAGACTTTCTCTGAATATCCTCCACTTGGCCGTTTTGCTGTCCGAGACATGCGTCAAACTGTGGCTGTTGGAGTCATCAAGGCTGTGGAGAAGAAGGAGGCTGGTGCAGCAGGTAAGATCACCAAGTCAGCATTGAAGAAGAAGTGA 855 0.4725 MDATTPKYSKGRYDEIVKEVSLYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIETVPVGRVETGVLIPGMVVTFAPTGLTTEVKSALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSHVIILNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKEIEKEPKFLKNGDAGIIKMIPTKPVVVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKEAGAAGKITKSALKKK* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2865 284 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 162 265 IPR009001 -
Mal1g2865 284 PANTHER TRANSLATION FACTOR 1 283 - -
Mal1g2865 284 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 92 IPR027417 -
Mal1g2865 284 Gene3D Translation factors 159 266 - -
Mal1g2865 284 PANTHER ELONGATION FACTOR 1-ALPHA 1 283 - -
Mal1g2865 284 Coils Coil 282 284 - -
Mal1g2865 284 Gene3D - 6 71 IPR027417 -
Mal1g2865 284 SUPERFAMILY Translation proteins 77 196 IPR009000 -
Mal1g2865 284 CDD EF1_alpha_II 76 156 - -
Mal1g2865 284 Pfam Elongation factor Tu C-terminal domain 157 265 IPR004160 -
Mal1g2865 284 CDD EF1_alpha_III 159 262 - -
Mal1g2865 284 Gene3D Translation factors 72 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2865 Mal-Chr1 40986865 40987749 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2865 1 273 Eukaryotic Initiation Factors Gene Family AT5G60390 88.339 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2865 K03231 - gmx:100801611 506.908