Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2860 ATGGATCATTCTATATTCTATATTGTTTTGTTTGTGTCCATTTTCTGTGTTGGAATTTCATTGGCTTCTTCTATAGAAGATCAAAAGAGAGATAAGATTGGTCAATTACCAGGGCAACCAAAGAATGTTGGATTTGAACAGTATTCAGGCTATGTGACTGTGAATGAAGAGAGTGGAAGAGCACTGTTTTACTGGTTAACTGAAGCACCATTGAACCGTGGACCCAATTCAAGGCCATTAGTTTTATGGCTTAATGGTGGTCCTGGTTGTTCTTCTATTGCTTATGGTGCTTCTGAAGAAATTGGTCCTTTTCGTATTAGGCCTCATGGCAAATCACTTTTCTTGAATCCTTATGCTTGGAATAATTTGGCAAATATACTGTTTCTTGATTCTCCAGCTGGTGTTGGTTTTTCTTATTGTAATAAAACAACAGATCTGTACACATTTGGTGACCAGAAAACAGCTGAGGATGCATATATTTTTCTTGTTAAATGGTTTGAAAGATTTCCTCAGTATAAGCATAGAGAATTCTACATTGCTGGGGAAAGTTATGCAGGTCACTATGTTCCTCAGTTGGCTCAACTTGTTTATCAGAGAAATAAGGGAATCAATAATCCAGTTATCAATTTTAAGGGATTTATGGTTGGAAATGGTGTTACTGATGATTATCATGATTATGTTGGAACATTTGAGTATTGGTGGACTCATGGTCTGATTTCAGATTCGACTTATAGGATTCTAAGAATTGCTTGTGATTTTGGATCTTCTCAGCATCCATCAGTGCAATGTTTTCAAGCTCTTAGAGTTGCTTTTGCTGAGCAAGGAAATATTGATCCCTATAGCATTTATACACCGCCTTGTAACATTACGGCATCGCTCAGAAGCGGCTTGAACGGTCGTTATCCATGGATGTCTAGAGCATATGATCCGTGTACCGAAAGGTATTCTGATGAGTATTTCAACCGTCCAGATGTTCAGAAGGCGCTTCATGCCAATGTAACAGGGATTCCATATCCATGGAAGACATGCAGTGATATTGTTGGGCATTATTGGACTGATTCTCCATTGTCTATGCTTCCTATATATCATGAACTTATTAATGCTGGTCTCAAGATATGGGTATTCAGCGGGGACACTGATTCTGTAGTTCCACTGACTGCAACTCGATATTCTATTGACGCCTTGAAGCTACCAACCATCATCAACTGGTATCCATGGTATGATAGTGGCAAGGTTGGTGGATGGAGCCAAGTTTATAAAGGGCTCACATTAGTCACAATAAGAGGTGCTGGACACGAGGTTCCTCTTCATAGGCCTCGCGAAGCGTTTATTCTTTTTAGATCATTCTTGGAGAACAAGTATATGCCATCAATTTCTGCCTGCTGCACATGGACCGGTCATTGGTTGTGCGCCAGAGCTGCACGATGA 1428 0.3985 MDHSIFYIVLFVSIFCVGISLASSIEDQKRDKIGQLPGQPKNVGFEQYSGYVTVNEESGRALFYWLTEAPLNRGPNSRPLVLWLNGGPGCSSIAYGASEEIGPFRIRPHGKSLFLNPYAWNNLANILFLDSPAGVGFSYCNKTTDLYTFGDQKTAEDAYIFLVKWFERFPQYKHREFYIAGESYAGHYVPQLAQLVYQRNKGINNPVINFKGFMVGNGVTDDYHDYVGTFEYWWTHGLISDSTYRILRIACDFGSSQHPSVQCFQALRVAFAEQGNIDPYSIYTPPCNITASLRSGLNGRYPWMSRAYDPCTERYSDEYFNRPDVQKALHANVTGIPYPWKTCSDIVGHYWTDSPLSMLPIYHELINAGLKIWVFSGDTDSVVPLTATRYSIDALKLPTIINWYPWYDSGKVGGWSQVYKGLTLVTIRGAGHEVPLHRPREAFILFRSFLENKYMPSISACCTWTGHWLCARAAR* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2860 475 SUPERFAMILY alpha/beta-Hydrolases 29 455 IPR029058 -
Mal1g2860 475 Gene3D - 311 347 - -
Mal1g2860 475 PANTHER CARBOXYPEPTIDASE 16 457 - -
Mal1g2860 475 ProSitePatterns Serine carboxypeptidases, serine active site. 179 186 IPR018202 GO:0004185
Mal1g2860 475 Pfam Serine carboxypeptidase 37 452 IPR001563 GO:0004185|GO:0006508
Mal1g2860 475 Gene3D - 358 451 - -
Mal1g2860 475 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 16 457 IPR001563 GO:0004185|GO:0006508
Mal1g2860 475 ProSitePatterns Serine carboxypeptidases, histidine active site. 422 439 IPR033124 GO:0004185
Mal1g2860 475 Gene3D alpha/beta hydrolase 27 289 IPR029058 -
Mal1g2860 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Mal1g2860 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Mal1g2860 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 422 435 IPR001563 GO:0004185|GO:0006508
Mal1g2860 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2860 Mal-Chr1 40903467 40907790 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2860 321 453 Calmodulin-binding Proteins AT2G22960 29.104 3.39e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2860 K16297 - gmx:100805722 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2860 1 40903467 40907790 Mal1g2860 1 40903467 40907790 ECH