Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2840 ATGGCTGGACAAAACTTGGTGAACGAGATAGACTGCTTCAATGTGTTTGACAACATTGATGACTTCAATTTCCTTGATTACCCCGTCGACGCCATTGACGATGCTGCCGCTTCCTTGACATCCTCCTCAGGAAACTGCAACTCTTTAGCGAGTATTTGGCCGAATGAATTCGACTCGGTGTTCACCGGCGGCAACAGTACTTCAGACCTTTCGGCGGAGCTGCCCCTTGTTCCGTTCAACGACGACCTTCTTCCATTGGAATGGGTGTCCAACATTGTGGATGATTCATTTTGTGAGGAGAGTCTCACAATGAAGGTGGAGCAGCAACCATCTTCATCTGCCTCCAAAGAGGACTCTGTGCATAGCCAATTAAGTCCGGTTTCCGTCCTTGAAAGCAGTAGCTCATGCTCTGGTGGGAAGACAGTGGGATTCCCCATGCCTTGCGTACGTGCACGCACCAAGCGTCCACGCCCTTCAACCTTCAACCCTCGCTCCGCCATGCAACTCATTTCTCCTACGTCCTCTTTTGTTGGGGAGAATGTGCAGCCTAATCTTATCTCCACCAAGGCGCTGCCTGTAGATTTTGAAAATTTTGCTGAGTCCCGAATTATGGCCAAAAAACCAAAGCTAGCTTCGGGAGAGACCAAGAAGAAGAAGAAAATCAAGGCGCCACTTCCTGCTGCTCCAGTTGACGGCGAACAGAATGGTTCACTACCTGTCAGGAAATGCATGCATTGTGAGATAACTAAGACTCCACAATGGAGGGCAGGGCCAATGGGGCCAAAAACACTCTGCAATGCTTGCGGTGTTCGCCACAAGTCAGGCAGACTTTTCCCTGAATACCGGCCTGCTGCAAGTCCTACTTTTTGTCCATCCTTGCACTCAAATTCCCACAAAAAGGTGCTTGAAATGAGATCCAAGGATGATTTTGAATCACATTCGGCTGAACTCATTCCAAACACAAACAACATTCTCGCTCTAGAATACAACATTTGA 996 0.4849 MAGQNLVNEIDCFNVFDNIDDFNFLDYPVDAIDDAAASLTSSSGNCNSLASIWPNEFDSVFTGGNSTSDLSAELPLVPFNDDLLPLEWVSNIVDDSFCEESLTMKVEQQPSSSASKEDSVHSQLSPVSVLESSSSCSGGKTVGFPMPCVRARTKRPRPSTFNPRSAMQLISPTSSFVGENVQPNLISTKALPVDFENFAESRIMAKKPKLASGETKKKKKIKAPLPAAPVDGEQNGSLPVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRHKSGRLFPEYRPAASPTFCPSLHSNSHKKVLEMRSKDDFESHSAELIPNTNNILALEYNI* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2840 331 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 241 300 - -
Mal1g2840 331 CDD ZnF_GATA 242 289 IPR000679 GO:0006355|GO:0043565
Mal1g2840 331 ProSitePatterns GATA-type zinc finger domain. 243 268 IPR000679 GO:0006355|GO:0043565
Mal1g2840 331 Gene3D - 240 287 IPR013088 GO:0006355|GO:0008270
Mal1g2840 331 ProSiteProfiles GATA-type zinc finger domain profile. 237 273 IPR000679 GO:0006355|GO:0043565
Mal1g2840 331 PIRSF Txn_fac_GATA_plant 1 329 IPR016679 GO:0003677|GO:0005634|GO:0045893
Mal1g2840 331 MobiDBLite consensus disorder prediction 209 233 - -
Mal1g2840 331 PANTHER GATA TRANSCRIPTION FACTOR 1 329 - -
Mal1g2840 331 Pfam GATA zinc finger 243 276 IPR000679 GO:0006355|GO:0043565
Mal1g2840 331 SMART GATA_3 237 287 IPR000679 GO:0006355|GO:0043565
Mal1g2840 331 PANTHER GATA TRANSCRIPTION FACTOR 8 1 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2840 Mal-Chr1 40312139 40314453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2840 14 309 C2C2-Gata Transcription Factor Family AT1G08010 36.393 3.10e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mal1g2840 GATA 3.9e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2840 - - gmx:100815693 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2840 1 40312139 40314453 Mal1g2840 1 40312139 40314453 ECH