Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2826 ATGGAGTTTTCAAATGGAGATCATAGCAATGGTACTAGTTGTAACGGTTCTTCCATGAATCTTTGCAATGGTGGAACAAAAGCTAGTAACATTAATGATCCTTTGAATTGGGGTATGGCTGCAGATTCTATGAAGGGTAGTCACCTAGATGAGGTGAAGCGTATGGTAGAGGAATACCGGAAACCGGTTGTGGCATTAGGTGGAAAAGGTCTAACAATATCTCAAGTGGCTGCGGTTGCGACCCATAGTACCGGTGTGGCGGTTGAGCTTGCCGAAGAGGCACGCTCAGCCGTTAAAGCTAGTAGTGATTGGGTGGTTGATAGTATGAATAAAGGGGTTGATAGCTATGGAGTCACCACTGGGTTTGGTGCAACCTCACACAGGAGAACAAAACAAGGTGGTGCCCTTCAAAATGAACTCATCAGATTTCTGAATGCTGGAATCTTCGGCAATGGAACAGAATCATCTCAGACATTACCTCACACAGCCACAAGAGCAGGCATGTTGGTTAGAATCAACACATTGCTTCAAGGATATTCAGGAATCAGATTTGAAGTCATGGAAGCCATAGCAAAATTTCTGAACCATAACATAACACCATGTCTCCCTCTAAGAGGCACAATCACTGCATCAGGTGACTTAGTTCCTTTATCATATGTTGCTGGCCTTTTAATTGGAAGACCAAATTCAAAATCTATTGGACCTAATGGAGAAGTTCTCAATGCTAAAGAAGCTTTTCAACTAGCTGGAATTGAAACTGGTTTCTTTGAGTTGCAACCTAAAGAAGGTTTAGCATTGGTGAATGGTACTGCTGTTGGATCAGGTTTGGCTTCATTGGTTCTTTTTGATACAAATTTACTAGTTGTTCTCTCCGAACTTTTGTCTGCGATTTTCGCGGAAGTTATGCAAGGAAAACCCGAATTCACTGACCATTTGACACATAAGTTGAAGCACCATCCTGGTCAAATTGAGGCTGCGGCTATTATGGAACATATTTTGGATGGAAGTTATTATGTTAAGGCTGCACAAAAAGTACATGAGATTGATCCACTTCAGAAGCCTAAACAAGATAGGTACGCGCTTCGAACATCACCGCAGTGGCTTGGACCGCAGATTGAAGTGATTCGACACGCAACAAAGATGATTGAGAGGGAGATAAACTCTGTGAATGACAATCCACTTATTGATGTTTCAAGGAATAAGGCACTTCATGGAGGAAATTTCCAAGGGACACCGATCGGTGTTTCGATGGACAACACACGTTTAGCCATTGCTTCCATTGGTAAACTCATGTTTGCTCAATTCTCTGAGCTTGTGAATGATTTCTATAACAACGGATTGCCTTCAAATCTAACTGGTAGCCGCAATCCGAGTTTGGATTATGGCTTCAAAGGAGCAGAAATTGCAATGGCATCTTATTGCTCAGAACTTCAATACCTTGCTAATCCTGTCACCACTCATGTTCAAAGTGCTGAACAACATAACCAAGATGTTAACTCTTTAGGCTTGATTTCATCAAGAAAAACAGCTGAAGCAGTTGAAATATTGAAGCTCATGTCATCCACTTTCTTAGTTGCATTGTGCCAAGCTATTGATCTGAGGCACATTGAGGAAAACTTGAAAAGTGTGGTCAAGAACACTGTGAGTCAAGTGGCTAAGAGAATTCTCACTGTTGGTGTAAATGGTGAGTTGCATCCATCAAGGTTTTGTGAGAAGGATTTGCTCAATGTTGTTGAACGTGAGTATGTTTTTGCTTACATTGATGACCCTTGCAGTGCTACATACCCTCTAATGCAGAAGCTGAGACATGTACTAGTTGATCATGCATTGGAAAATGGTGATAAGGAGGCAAATTCAGGAACCTCAATTTTCCAAAAGATTGGAGCTTTTGAGGAAGAGCTTAAGACCCTTTTGCCTAAAGAGGTGGAAAATGCAAGGGTTGAAATTGAAAATGGAAAACCTGAATTTCCTAATAGGATCAAGGAATGTAGATCATATCCATTGTACAAGTTCATGAGAGAAACTTTGGGAACAAGTTTGCTGACAGGTGAGAAGATTAGGTCACCTGGTGAGGAATGTGATAAGGTTTTCACAGCATTGTGTGATGGAAGGTTTATTGATCCAATGTTGGATTGTCTAAAGGAGTGGAATGGTGCTCCTCTACCTATTTGCTAG 2175 0.4133 MEFSNGDHSNGTSCNGSSMNLCNGGTKASNINDPLNWGMAADSMKGSHLDEVKRMVEEYRKPVVALGGKGLTISQVAAVATHSTGVAVELAEEARSAVKASSDWVVDSMNKGVDSYGVTTGFGATSHRRTKQGGALQNELIRFLNAGIFGNGTESSQTLPHTATRAGMLVRINTLLQGYSGIRFEVMEAIAKFLNHNITPCLPLRGTITASGDLVPLSYVAGLLIGRPNSKSIGPNGEVLNAKEAFQLAGIETGFFELQPKEGLALVNGTAVGSGLASLVLFDTNLLVVLSELLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSYYVKAAQKVHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRHATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLTGSRNPSLDYGFKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTAEAVEILKLMSSTFLVALCQAIDLRHIEENLKSVVKNTVSQVAKRILTVGVNGELHPSRFCEKDLLNVVEREYVFAYIDDPCSATYPLMQKLRHVLVDHALENGDKEANSGTSIFQKIGAFEEELKTLLPKEVENARVEIENGKPEFPNRIKECRSYPLYKFMRETLGTSLLTGEKIRSPGEECDKVFTALCDGRFIDPMLDCLKEWNGAPLPIC* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2826 724 PANTHER HISTIDINE AMMONIA-LYASE 23 724 IPR001106 -
Mal1g2826 724 Gene3D Fumarase/aspartase (Central domain) 271 719 - -
Mal1g2826 724 Pfam Aromatic amino acid lyase 71 545 IPR001106 -
Mal1g2826 724 SUPERFAMILY L-aspartase-like 33 724 IPR008948 GO:0003824
Mal1g2826 724 CDD PAL-HAL 69 534 IPR001106 -
Mal1g2826 724 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 206 222 IPR022313 GO:0016841
Mal1g2826 724 Gene3D - 24 270 IPR024083 -
Mal1g2826 724 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 23 724 - -
Mal1g2826 724 Gene3D - 537 658 IPR023144 -
Mal1g2826 724 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 33 714 IPR005922 GO:0005737|GO:0006559|GO:0016841
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2826 Mal-Chr1 40082349 40087971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2826 1 724 Monolignol Biosynthesis Gene Families AT2G37040 79.121 0.0 1216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2826 K10775 - gmx:100801470 1270.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2826 1 40082349 40087971 Mal1g3063 1 45564704 45568650 ECH
Mal3g4204 3 121086910 121089805 Mal1g2826 1 40082349 40087971 ECH
Mal1g3063 1 45564704 45568650 Mal1g2826 1 40082349 40087971 ECH
Mal1g2826 1 40082349 40087971 Mal1g2826 1 40082349 40087971 ECH