Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2823 ATGGGTAATGTTGAAATCCCCAATTGGCTTGAGGGGTTGCCACTGGCTCCTGAATTTCGACCTACTGATACTGAATTTTCTGACCCAATTGCTTATATTTCAAAGATTGAGGAAAAAGCTAGTAAATTTGGGATATGCAAGATTATCCCACCCTTGCCTAAACCTTCAAAAAAATATGTTTTTTCTAATTTGAATAAGTCCCTCTTGAAGCGTCCTGAATTGGGTCCAGATAGTAGTTCTTTAGGTGTTAGTAATTTTTGGAAAACAGGTTCCGGGGATGGGGATAGTAGTAACAATGGGATATCGCGGGCCGTGTTTACCACGAGGCAACAAGAAGTGGGGCAGAATGTGAAAAAAACTAAAGGGGTAGTTCAGAAGCCAATGTCATGTGTTCATAAGCAAGTATGGCAAAGTGGAGAGGTTTATACATTGGAACAGTTTGAGTCTAAATCAAAGTCTTTTGCAAGAAGCGTTCTGGGCACGACGAAGGATGTTTCTCCACTGGTTGTAGAGGCTATGTTTTGGAAGGCAGCTTCGGAGAAGCCTATATATGTGGAGTATGCTAATGACGTGCCTGGCTCTGCTTTTGGAGAATTACAGGGTCAATTTTATCGTAGTCATCGAAGGCAACGGAAAAGGACTGATTATAAGAGTAGAGTTGATAGCTCTGTTTGTAAAGAAACTGAAATGGGTGGTGTAAATGATACACAAAATGACGAGTCTAATGGCGTTGCTTCCCCAAGTCATGCAGAGTCATGTTTAGAGACGTCTAAATCAGCTATGACTTTGTCAACATCTACACCAAATGAGGCGTTACAGCCTTCTAAGGAGATGATTTCAGATGCTGACAATGATATGCAAGGCACTGCTGGTTGGAAGATTTCAAATAGTCCTTGGAATCTGCAAGTTATTCCTCGTGCTTCAGGCTCACTAACACGTTTCATGCCGGATGATATTCCTGGTGTTACTTCACCCATGATATACATTGGTATGTTGTTCAGTTGGTTTGCCTGGCATGTAGAGGATCATGAGCTTCACAGCTTGAATTTTCTTCACACTGGCTCGTCAAAGACTTGGTATTCTGTTCCTGGAAATTATGCCTTTGCTTTTGAGGAAGTCATCCGCACCAAGGGTTATGGTGGTGATGTTGATCAATTAGCTGCTTTGAAACTTTTGGGCGAGAAAACAACTCTTTTATCACCTGAGGTAGTTGTTGCATCTGGGATTCCTTGTTGCAGGTTAGTACAGAATCCTGGTGAATTTGTTGTGACTTTTCCAAGAGCTTATCACGTAGGATTCAGCCATGGTTTTAACTGTGGGGAAGCAGCTAACTTCGGGACTCCACAATGGCTTGGCATAGCTAAAGAAGCTGCGGTGCGTAGAGCTACAATGAATCATCTTCCTATGCTTTCCCATCAGCAACTGCTTTACTTGCTGACCATGTCTTTTATTTCAAGTGTGCCAAGAACACTATTACCTGGTGTGCGCAGTTCTCGTCTCAGAGACCGTCAGAAAGAAGAAAGAGAGATTCTAGTAAAACAGGCTTTTATAGAAGATATGCTGCACGAAAACAAGCTTCTATCCATTCTTCTTGGAAAAGAAGCTACTAAAGAAGTTGTTTTATGGAATGTTGATTTACTACCAGATTCTGGCAAATATCGCCAGTTGCCTGATTTAGCTTCTTCTTCTGGAACATATATAGCGGACGTGTCAAATGATAATATTAGTTCTGCAGATAAGAGTAGCCATTGTCTGCTTGATGAGATGAGTTTGTACATGGAGAATTTGACTGATTCAGATGTTGGCTGTGATGATCTTCCATGTCACTTACAAACTGATTCAGGAGCATTGGTTTGTGTGGGTTGTGGAATACTTGGTTTTCCATTTATGACATTGATACAACCAACTGAAAAATTGATAATGGAACTTCTTCCTGATCATCATCTAGTTGAAGATTCCTCTCTGAACTCTGTTGGCTCCCTTCATAGTGCAGTCTCAAGGGATCTTTCTGTTTCTGAATTTGCTTCTGCAAAGGATTCGTCGGATCAGTCATTGAACGAGTGCAATAAATGTTGGAACACCTCCAGTAAATTTTTGAAGCCGCGGATTTTCTGCTTGGAGCATGCTGTTCAGGTAGTGGAGATGTTGCAGAGCAAAGGTGGAGCCAATGTACTTATAATTTGCCATTCAGACTATCCGAAAATAAAGGCACATGCCAGGGCAATTGCAGAAGAGATACAAAGTGATTTTGATTATAACGAGGTTCCAATGGATATTGCATCCCCAGAAAATTTGGCTCTGATAGATCTGGCAATTGATGGTAAAGAACTTGATGAATGTGAAGATTGGACATCTAAACTAGGTCTTAACATGCGGTTTTGTGTCAATAATATAAACAAATCTCCATGTAAACAAGTTCCTTTTACACTAGCATTAGGGATGCAGTTCTATGATAAACGTCCTGGTTTATATTTAAATTGGCATTCACAGAAAGCTCGATCTAAAAGGTCAAACCGTTTAGCTCTATCTAAACCTGACAACATTCAGAGAAAGAAGGATGATCAATTGCTGGAAAGAAAAGATGGCTCCACTGCTAAAAAGAAACTAATTCAATATTCAAGGAGAAAGTTCAAGTCAAAGCAAAGTTGTTTCTCTGTAGCAAGCATGGTCTGTGAATCCCGTGAAAAGTCCAAAAATGTGTCAGCTGTTTTGAGTGGGGAGCATTATAAATGTGTTTCTAAAGATGAGCTTGACACAGACAATTTCAGGAGCGATTGTGCATTGTCACGTGGCCTTGCTTCTGCTGCAATGTCTCCATTACATAATGAAATCCAGAATGTTGAAGCTCCCACTAGTAGGAGCTTGAATACTAGTGTCTCAGAAATATGCGGCAGCCAGGATTGTCAGAACAAGAAATATTCTGGCTCACTTGCAAATGGAATAGATGAAAATATTGATGTGTTTGGAAACAACCAAATTACAGAAGCAATTGCCATTGATAGCAAGTATAATTTGGATGGTGAAGAGTGTCAAGAACATCAGTCTACCTGCAAAAGCAACACTGGAGCTGTTTTATCTACTGCTTCATTGGTACACCAAACCGCTCTAGCCACTGTGGATGGAAGTTTTGAAAGTCCAATTAGTAACTATGCTGAAGAAAGGGTTAGCAATTCTATGTCATTGAAAGAGATAAGTGAGGGAGAAAGTAAATCTTTGAATGAAATGGACAAGGAACCTCTAAAGGATGATAAAGCAATAAGTGAACATACTCCAAATGCAGAGGTTTGTGAAGTTCCAAGAGCGCTTTATGCTGCTGCAGATTTCAATAATACAGTAAGCTTGGATACTAAGATACAGCAAGAACTACAAGTTGGAAAAAGTGTTGAAAAGGAAATAATTCAGTCCACTCATATTTCAGCAAAACAATTGTGTGAATCTACAAGTGGGGAATATGCCGAGGGGTTACACAATGAAGTGATTTTAGAGTCTTCAAAGCAGTGTCAGATCCAAAATGAGAATAGTAGAACTGATGAGGAACCTGTTTCTAGTTATGTTGCAAAAGATGACAATAGAAGTGTAACTATATTAGGATTAGGTTGTTCTGACGTTTCAGCAGAAACCTGTCCTAAGGAGGACTCGTGTATTCAATTTCTTTCGAATACAGAAAAGGAAAATAAAATCCAACCAATTAATAGAACTGATGAGGAGCTTTCTGTTTCAACCCAGGAATGTTCTCAAGCCGAGAAAAAGACTTGCAATAGAGAAAACATAAATGGAAGCGAAGTTGATTTGTCACAAGATAATCGGGAGCTGGAAAGCTGTGAGTTGACTACAGAAGTTCCCAAATCAAATGCTGGGGTGAAAAAGAAGAGGAAAATGGAAGACATGGAAAAGAATCAATTTGATTGCTTTGACTTTATAAGAAGTCCATGTGAGAGGCTGAGGCCAAGAACTGGGAAGATTGCCACTGGAAAAAGCGTAGGGGACAACAGCCAAAATGACGAGGAAAATCCGGTAGCTAAAAGGACACGGAGACCTCCCGAGTCTTCTGTTCCTCGCAAGGATAAAAAAGCCAATGTTAAAAGGCCGCACAAGTGTGACCTTGATAATTGCCGTATGAGATTCACCACCAAGGCTGAGTTACAGTTGCACAAGCGTAACCTTTGCCCACATGAAGGGTGTGGTAAGAAATTCAGTTCCCACAAATACGCATTGATTCACCAGCGCGTTCATGAGGATGATAGGCCCTTTAAATGCTCATGGAAAGATTGTTCCATGTCATTCAAGTGGTCATGGGCAAGGACAGAGCATATAAGGGTGCATACTGGGGAGAAGCCTTATCAATGTAAGGTCGAGGGTTGTGGCCTTTCTTTCAGGTTTATATCAGATTTTAGCAGGCACAGGCGGAAAACAGGACACTACGTGAAATCTCCCGCTTGA 4440 0.4065 MGNVEIPNWLEGLPLAPEFRPTDTEFSDPIAYISKIEEKASKFGICKIIPPLPKPSKKYVFSNLNKSLLKRPELGPDSSSLGVSNFWKTGSGDGDSSNNGISRAVFTTRQQEVGQNVKKTKGVVQKPMSCVHKQVWQSGEVYTLEQFESKSKSFARSVLGTTKDVSPLVVEAMFWKAASEKPIYVEYANDVPGSAFGELQGQFYRSHRRQRKRTDYKSRVDSSVCKETEMGGVNDTQNDESNGVASPSHAESCLETSKSAMTLSTSTPNEALQPSKEMISDADNDMQGTAGWKISNSPWNLQVIPRASGSLTRFMPDDIPGVTSPMIYIGMLFSWFAWHVEDHELHSLNFLHTGSSKTWYSVPGNYAFAFEEVIRTKGYGGDVDQLAALKLLGEKTTLLSPEVVVASGIPCCRLVQNPGEFVVTFPRAYHVGFSHGFNCGEAANFGTPQWLGIAKEAAVRRATMNHLPMLSHQQLLYLLTMSFISSVPRTLLPGVRSSRLRDRQKEEREILVKQAFIEDMLHENKLLSILLGKEATKEVVLWNVDLLPDSGKYRQLPDLASSSGTYIADVSNDNISSADKSSHCLLDEMSLYMENLTDSDVGCDDLPCHLQTDSGALVCVGCGILGFPFMTLIQPTEKLIMELLPDHHLVEDSSLNSVGSLHSAVSRDLSVSEFASAKDSSDQSLNECNKCWNTSSKFLKPRIFCLEHAVQVVEMLQSKGGANVLIICHSDYPKIKAHARAIAEEIQSDFDYNEVPMDIASPENLALIDLAIDGKELDECEDWTSKLGLNMRFCVNNINKSPCKQVPFTLALGMQFYDKRPGLYLNWHSQKARSKRSNRLALSKPDNIQRKKDDQLLERKDGSTAKKKLIQYSRRKFKSKQSCFSVASMVCESREKSKNVSAVLSGEHYKCVSKDELDTDNFRSDCALSRGLASAAMSPLHNEIQNVEAPTSRSLNTSVSEICGSQDCQNKKYSGSLANGIDENIDVFGNNQITEAIAIDSKYNLDGEECQEHQSTCKSNTGAVLSTASLVHQTALATVDGSFESPISNYAEERVSNSMSLKEISEGESKSLNEMDKEPLKDDKAISEHTPNAEVCEVPRALYAAADFNNTVSLDTKIQQELQVGKSVEKEIIQSTHISAKQLCESTSGEYAEGLHNEVILESSKQCQIQNENSRTDEEPVSSYVAKDDNRSVTILGLGCSDVSAETCPKEDSCIQFLSNTEKENKIQPINRTDEELSVSTQECSQAEKKTCNRENINGSEVDLSQDNRELESCELTTEVPKSNAGVKKKRKMEDMEKNQFDCFDFIRSPCERLRPRTGKIATGKSVGDNSQNDEENPVAKRTRRPPESSVPRKDKKANVKRPHKCDLDNCRMRFTTKAELQLHKRNLCPHEGCGKKFSSHKYALIHQRVHEDDRPFKCSWKDCSMSFKWSWARTEHIRVHTGEKPYQCKVEGCGLSFRFISDFSRHRRKTGHYVKSPA* 1480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2823 1479 MobiDBLite consensus disorder prediction 1335 1361 - -
Mal1g2823 1479 ProSiteProfiles JmjC domain profile. 293 462 IPR003347 -
Mal1g2823 1479 MobiDBLite consensus disorder prediction 207 251 - -
Mal1g2823 1479 MobiDBLite consensus disorder prediction 1317 1361 - -
Mal1g2823 1479 ProSitePatterns Zinc finger C2H2 type domain signature. 1389 1411 IPR013087 -
Mal1g2823 1479 SMART cupin_9 293 462 IPR003347 -
Mal1g2823 1479 PANTHER LYSINE-SPECIFIC DEMETHYLASE 1 1468 - -
Mal1g2823 1479 ProSiteProfiles Zinc finger C2H2 type domain profile. 1417 1446 IPR013087 -
Mal1g2823 1479 Gene3D Cupin 9 466 - -
Mal1g2823 1479 SUPERFAMILY beta-beta-alpha zinc fingers 1427 1470 IPR036236 -
Mal1g2823 1479 ProSiteProfiles Zinc finger C2H2 type domain profile. 1387 1416 IPR013087 -
Mal1g2823 1479 SUPERFAMILY Clavaminate synthase-like 297 458 - -
Mal1g2823 1479 Coils Coil 1230 1250 - -
Mal1g2823 1479 Pfam jmjN domain 17 50 IPR003349 -
Mal1g2823 1479 Gene3D Classic Zinc Finger 1419 1442 - -
Mal1g2823 1479 Gene3D Classic Zinc Finger 1443 1473 - -
Mal1g2823 1479 ProSitePatterns Zinc finger C2H2 type domain signature. 1449 1473 IPR013087 -
Mal1g2823 1479 SMART JmjN_1 15 55 IPR003349 -
Mal1g2823 1479 ProSiteProfiles JmjN domain profile. 16 57 IPR003349 -
Mal1g2823 1479 ProSiteProfiles Zinc finger C2H2 type domain profile. 1447 1478 IPR013087 -
Mal1g2823 1479 PANTHER LYSINE-SPECIFIC DEMETHYLASE ELF6-RELATED 1 1468 - -
Mal1g2823 1479 Pfam JmjC domain, hydroxylase 327 445 IPR003347 -
Mal1g2823 1479 Gene3D Classic Zinc Finger 1387 1418 - -
Mal1g2823 1479 SUPERFAMILY beta-beta-alpha zinc fingers 1388 1420 IPR036236 -
Mal1g2823 1479 SMART c2h2final6 1417 1441 IPR013087 -
Mal1g2823 1479 SMART c2h2final6 1447 1473 IPR013087 -
Mal1g2823 1479 SMART c2h2final6 1387 1411 IPR013087 -
Mal1g2823 1479 SMART c2h2final6 1364 1386 IPR013087 -
Mal1g2823 1479 MobiDBLite consensus disorder prediction 229 251 - -
Mal1g2823 1479 ProSitePatterns Zinc finger C2H2 type domain signature. 1419 1441 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2823 Mal-Chr1 40056284 40064672 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2823 1 876 C2H2 Transcription Factor Family AT5G04240 53.303 0.0 911
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal1g2823 JmjC 9.2e-36 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2823 - - gmx:100819845 2057.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2823 1 40056284 40064672 Mal1g2823 1 40056284 40064672 ECH