Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2795 ATGGCGGCTGCTTCCTCATCTACATCATTCTTTGGAATTAGAGAAGAAAATCAAAGTCAGATAACACATCATCAATCCACCACTACTTCTGCTACTTCCTCAGCTCCTTCAAGTTCAACCACAGTTCCTCCAAAGAAAAGAAGAAATCAACCAGGAACACCAAATCCAGATGCAGAAGTGATAGCACTATCTCCCAAGACACTAATGGCAACAAATAGATTTATATGTGAGGTTTGCAATAAAGGGTTTCAAAGGGAGCAAAATCTTCAACTTCATAGAAGAGGACACAATCTTCCTTGGAAGCTAAAACAAAAGTCTAACAAAGAGCCAAAGAGAAAGGTTTATTTGTGTCCTGAACCTACATGTGTTCATCATGATCCTTCAAGAGCTTTAGGAGACCTCACTGGGATTAAAAAGCACTTCTCTCGTAAGCACGGTGAGAAGAAGTGGAAATGTGAAAAATGCTCAAAGAAATATGCTGTTCAATCTGATTGGAAAGCACATTCTAAGACTTGTGGTACTAGAGAATATAAATGTGATTGTGGCACCCTCTTCTCTAGGCGTGACAGTTTCATCACTCATAGGGCATTTTGTGATGCATTAGCACAAGAGAGTGCATTAAGACACCCTAATCCTTTTGGGAGTACTCATCATTTGTATGCCACAAATCATCACATGAGTTTAGGCCAAATTTCCCATCAATTGCAAAATCATCATAACCAAATTACATCATCCAATAACATTAATAACAACAACATTTTGCGACTTGGATCAGCACCACCAAAGTTTGAACAACAACACTTAATCTCATCACCACCTTTAAATCACTCTTCATCATTTGGACACTCAATCCCATCTTCATCAACATTCTTCAATATGAGTGATATTTCAAATCAATCCTTTGAAGAACAACAATCTCATCAAGGACAACAATTCTCAAACAAACAACTACATGGTCTAATGCAACTTCCTGATCTTCAAGGTAACACAAACATATCAAATTCTTCCAATCTTTTCAACCTCATGATTCATGATCAATTCAACAACATGAGTAGTAACCAAGGAACAACAATTTACATTAACAATAACAATACCAACAACACTCTAAGTGATCATCATCAAGTTGGTTTTGTCAATTCAATGCAACATGGTCAAAACATGTCTAGTCCTCATAACATGTCTGCCACTGCATTGCTTCAAAAAGCTTCTCAAATTGGTTCAACTAATTCAACCAACAACAACAAAGGTACTACTGCAGGAATGTGCAATAATGGTGATCATAACATTAATGCAAGTTTTGGAAATAGTAGAAGTTCAACAAGTATGGAAAATGATCATGACAACAATGATCTACATGGATTGATAAACTCTATTGCAAATGGAAACACATCCTCCATATTTGGCAATGAAAGCAACCTTAATATAAGGTTTGGAGAATCTGATAGGTTAACTTTAGATTTTCTTGGTGTTGGAGGAATAGTCAGAAACATGAGTAGTAGTGGATTTCCACAAAGTGCTTCATTGAATTATCATGACCTAAAATCAGCACAATCAAGTCAACATTTTGGAAGCTCAAATGTGATGCAATGA 1590 0.3648 MAAASSSTSFFGIREENQSQITHHQSTTTSATSSAPSSSTTVPPKKRRNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRRDSFITHRAFCDALAQESALRHPNPFGSTHHLYATNHHMSLGQISHQLQNHHNQITSSNNINNNNILRLGSAPPKFEQQHLISSPPLNHSSSFGHSIPSSSTFFNMSDISNQSFEEQQSHQGQQFSNKQLHGLMQLPDLQGNTNISNSSNLFNLMIHDQFNNMSSNQGTTIYINNNNTNNTLSDHHQVGFVNSMQHGQNMSSPHNMSATALLQKASQIGSTNSTNNNKGTTAGMCNNGDHNINASFGNSRSSTSMENDHDNNDLHGLINSIANGNTSSIFGNESNLNIRFGESDRLTLDFLGVGGIVRNMSSSGFPQSASLNYHDLKSAQSSQHFGSSNVMQ* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2795 529 Gene3D Classic Zinc Finger 128 206 - -
Mal1g2795 529 Gene3D Classic Zinc Finger 53 122 - -
Mal1g2795 529 SUPERFAMILY beta-beta-alpha zinc fingers 73 170 IPR036236 -
Mal1g2795 529 MobiDBLite consensus disorder prediction 429 448 - -
Mal1g2795 529 ProSitePatterns Zinc finger C2H2 type domain signature. 76 96 IPR013087 -
Mal1g2795 529 SMART c2h2final6 74 96 IPR013087 -
Mal1g2795 529 SMART c2h2final6 115 145 IPR013087 -
Mal1g2795 529 SMART c2h2final6 150 170 IPR013087 -
Mal1g2795 529 Pfam Zinc-finger double-stranded RNA-binding 74 96 IPR022755 -
Mal1g2795 529 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 1 500 - -
Mal1g2795 529 MobiDBLite consensus disorder prediction 1 48 - -
Mal1g2795 529 MobiDBLite consensus disorder prediction 1 59 - -
Mal1g2795 529 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1 500 - -
Mal1g2795 529 ProSiteProfiles Zinc finger C2H2 type domain profile. 74 96 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2795 Mal-Chr1 39616491 39620415 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2795 10 230 IDZ Gene Family AT2G02070 74.009 2.87e-115 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal1g2795 zf-C2H2_jaz 3.2e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2795 K25870 - gmx:100806198 548.51