Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2779 ATGGGAGAAGAATGGAAACCAAAATTGAAAATGATTTTTGATAGTGTTGAAGATGCTTGGAAATTTTGGGTAGATTATGGTGGAAAAGTTGGATTTGGAGTAAGGAAACAATATTCACACAAGAACAAAAATGGTGTGATTACTTCTTACAAGTTTGTTTGTTGTAAAGAAGGTTTGAGAAAAGCTGATAAACGAGATTATAAAACAAACAATCCACGACTAAAGACCAGAACAAATTGTCCAGTAAAGTTAGGAATTAAGAATGTCGATGGAAAATATATGGTGGTTGATTTTGTGGAGGTACACAATCATATTTTACATATACCAGAAACAATTCATATGCTGCCATGTCAGAGGAAAGTCTGTCAAATTCAATGTCAACAAATTGATCTAGCAGATGATGCAGGATTACAACAAAGGAAGTCATTTGACTTGATGAGTAAAGAAGTGGGAGGTCGAACTAACTTGGGATTTACTCGTATTGATCAAAAAAATTATCTTCGGAGAAAAAGACAAAGGAGTATGGAACATGGAGAAGCTGGTTATTTATTGCAATACTTCCAGAGAAAGTCGATGGGAAATCCAACTTTCTATCATGCATATCAAATGGATGCTGAAGAACAAATCACCAATGTGTTCTGGGCAGATGCAATGATGCTAATTGATTATGAGTATTTTGGTGATGTAATTTCTCTTGATTCAACATATTGCACAAATAGTTCACATAGACCGCTGGCAGTGTTCTCAGGATTCAACCATCATCGAAAAGCAGTGATTTTTGGGGCAGCATTATTATATGATGAAACAACAGAGTCATACAAGTGGCTCTTTGAGACCTTTTTAGAGGCTCATAAGCAAAAAATGCCCCAAACAATTTTTACTGATCAAGCCCAGGCAATGGCAAGTGCACTAGTTGAGGTTATGCCTGGAGCTTACCATGGATTATGTACATGGCACTTGATGCAAAATTGCATCAAGCTCTTAGGAAATTTGATGAAAGGTGGGTCTCATTTTCTTAGTGACTTTAAGAAGTGCATGTATGAATATGAAAATGAAGACCAATTTGAAGAAGGTTGGAAAGCTCTGCATGAAAAATACGATGTCAAGGATAAAACTTGGTTGCAAATAGTGTACACTATAAAGGAGAAATGGGCATCATGTTACATGAAGAAAGTTTTCACATTAGGAATGCGAAGCACTCAACTTAGTGAAAGTGTGAATGCAAGTATTAAGAGCTTTATGAATGTGAACTTGGGTATAATCAATTTTTTCAAGCGCTTTGAGGATGTTGTAGAAGAAAAGCGATATAATGAATTGAAGTGTGAATATGAAGCACGACAAAAGATTCCAAGACTATGGAACCCATATTCAAATATCTTGCAACAAGTATCTGAGCTTTACACTCCCACTGTTTTTGATCAATTCCAGCATGAGTATCAGTTGTTTGAAGCATGTTTAGTGAAAAGCATTAATGTTCAACGACCCTTAATTGACTGTGTTATTGTCATGTTGAATAATTTGGGAGAATGGCGAGTGTCATTTGATTTGGATAAGAATTCAATTTCTTGCTCTTGTCTTAAGTTTGAGAGTTTTGGCATACTTTGTTGTCATTGTCTAAAAGTGTTTATTCATATGGATGTCAAATCAATTCCAGAACATTATATCTTAAAAAGGTGGACCAAGTCAGCTAGAAGTGAGACTTTACCTGATGTTGGTGTGAGCTATGTGGTAGAAGAGGTTGATTTATCCCCAGCACAACGCTACAAGGAGATTTGCCCCCGCCTTATTAGGATAGCCAATGAAACATGTAGAAATCTAGAAACTTTCACATTGCTTTGCAAAGCTGTTAATGAATTGAGTAGGCAGATGAAAGAGTTTCACTTGCTTTCTCAAGTGAATGAGTTTGTTGGTAATGTGAATGAGCTTGCTAGTAGCAATGATGGTTTGTCACAAGCAAACGGATTCAAAAATAGAGAAGGAAAAAGGACTTCAAAACGTGGGAAAGGCTGGGTAGAGTGCCAACCAAAGAAAAATAGTGTCTCTAAAGCTTCACACATTCAGAAGAATAAAGGGCATGCAATGGATCAACTTGCGAGAAAAGAAAAAGATGATGACATAGGTGATTCACAAACACAAGGCCAATATGAAATGTCCAATTCAGGTGCACCTATTTGTCTCAATGGTTCATACAAAATACCATCCATGGAAAATAGTAACACTTTAAGTCAATTTGGTGTCGCTAGTTTTACTAGATTATTGATGGAAAACATGCATGGAGATGTTATTGACCAATTCATAAAGAAATGA 2307 0.3611 MGEEWKPKLKMIFDSVEDAWKFWVDYGGKVGFGVRKQYSHKNKNGVITSYKFVCCKEGLRKADKRDYKTNNPRLKTRTNCPVKLGIKNVDGKYMVVDFVEVHNHILHIPETIHMLPCQRKVCQIQCQQIDLADDAGLQQRKSFDLMSKEVGGRTNLGFTRIDQKNYLRRKRQRSMEHGEAGYLLQYFQRKSMGNPTFYHAYQMDAEEQITNVFWADAMMLIDYEYFGDVISLDSTYCTNSSHRPLAVFSGFNHHRKAVIFGAALLYDETTESYKWLFETFLEAHKQKMPQTIFTDQAQAMASALVEVMPGAYHGLCTWHLMQNCIKLLGNLMKGGSHFLSDFKKCMYEYENEDQFEEGWKALHEKYDVKDKTWLQIVYTIKEKWASCYMKKVFTLGMRSTQLSESVNASIKSFMNVNLGIINFFKRFEDVVEEKRYNELKCEYEARQKIPRLWNPYSNILQQVSELYTPTVFDQFQHEYQLFEACLVKSINVQRPLIDCVIVMLNNLGEWRVSFDLDKNSISCSCLKFESFGILCCHCLKVFIHMDVKSIPEHYILKRWTKSARSETLPDVGVSYVVEEVDLSPAQRYKEICPRLIRIANETCRNLETFTLLCKAVNELSRQMKEFHLLSQVNEFVGNVNELASSNDGLSQANGFKNREGKRTSKRGKGWVECQPKKNSVSKASHIQKNKGHAMDQLARKEKDDDIGDSQTQGQYEMSNSGAPICLNGSYKIPSMENSNTLSQFGVASFTRLLMENMHGDVIDQFIKK* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2779 768 Pfam SWIM zinc finger 511 544 IPR007527 GO:0008270
Mal1g2779 768 PANTHER OS03G0181600 PROTEIN 3 638 - -
Mal1g2779 768 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 3 638 IPR031052 GO:0006355
Mal1g2779 768 MobiDBLite consensus disorder prediction 649 669 - -
Mal1g2779 768 Pfam MULE transposase domain 229 323 IPR018289 -
Mal1g2779 768 Pfam FAR1 DNA-binding domain 21 106 IPR004330 -
Mal1g2779 768 SMART 26again6 521 548 IPR006564 GO:0008270
Mal1g2779 768 ProSiteProfiles Zinc finger SWIM-type profile. 510 546 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2779 Mal-Chr1 39366549 39369112 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal1g2779 MULE 2.4e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2779 - - ccaj:109815076 935.25