Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2743 ATGGAAGTTCTGTCTCTCTCCCTCACATTCACCAAATCTCAAACCTTTCCCTCTCTCAAACCAAAAAGCACAACCCAAATTCACCAACTTCCAATAAAAACAAACATACCCAACAAAAACAATCACTCTAATAATCTTTCCTCTTCTTCTTGTATCATTTCATGTAATTCCTCATTTACTAGAATTACAGCAACAAGTAACGAACCATCAATTTCACAAACTCATATGATGTTGTTCCCTGCTGGAAATTCAAAGCATTGGGTTGTTAGAATGGATAAACCTACCGTTGGTGTTGTCACCAAAGCTCAGATTGTTGACCATTATGCTCAAATTTTGACCAAAATCATGGGAAATGAGAAGGATGCACAAATGTGTATATATCATGTTTCATGGAAAACAAACTTTGGCTTTTGTTGTGAACTTGATGAGGATTGTGCTCGTGAGCTAGCTGGTGTGCCTGGTGTCTTGTCAGTTCAGCCAGATGATAATTTTGAGTCTGAAAATAAGGATTATGAAGGTAGAAACTTGGAAAATAGTTTGAATATGTCGAATTCTTCTGATGCAAGTCAGGAAGCTTTAGTGAAAACAAAGAAACTTTTTGTGACAGGGCTATCATTTTATACATCTGAGAAAACTTTGCGTGCCGCATTTGAAGGCTTTGGTGAGCTTGTTGAAGTTAAAGTTATAATTGATAAAATTTCAAAAAGGTCCAAGGGTTATGCATTTATTGAATACACCACAGAGGAAGCTGCAGGTGCAGCACTCAAAGAGATGAATGGCAAGATTATTAATGGATGGATGATAGTGGTAGATGTTGCCAAGACTACCCCACCGAGATACAACAAGGGTCGTGCCAGACCATCTGCTTGA 870 0.3805 MEVLSLSLTFTKSQTFPSLKPKSTTQIHQLPIKTNIPNKNNHSNNLSSSSCIISCNSSFTRITATSNEPSISQTHMMLFPAGNSKHWVVRMDKPTVGVVTKAQIVDHYAQILTKIMGNEKDAQMCIYHVSWKTNFGFCCELDEDCARELAGVPGVLSVQPDDNFESENKDYEGRNLENSLNMSNSSDASQEALVKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKVIIDKISKRSKGYAFIEYTTEEAAGAALKEMNGKIINGWMIVVDVAKTTPPRYNKGRARPSA* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2743 289 SMART rrm1_1 198 271 IPR000504 GO:0003723
Mal1g2743 289 Gene3D - 166 289 IPR012677 -
Mal1g2743 289 SUPERFAMILY RNA-binding domain, RBD 188 286 IPR035979 GO:0003676
Mal1g2743 289 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 71 165 IPR037045 -
Mal1g2743 289 PANTHER MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED 60 288 IPR039206 GO:0016554
Mal1g2743 289 PANTHER ORGANELLE RRM DOMAIN-CONTAINING PROTEIN 1, CHLOROPLASTIC 60 288 - -
Mal1g2743 289 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 199 265 IPR000504 GO:0003723
Mal1g2743 289 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 197 275 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2743 Mal-Chr1 38786964 38789841 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2743 194 282 C2H2 Transcription Factor Family AT2G19380 32.584 7.68e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2743 - - mtr:MTR_1g092860 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2743 1 38786964 38789841 Mal1g2743 1 38786964 38789841 ECH