Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2728 ATGGGAGAAGAAGCGGTTTATGTGCATGCATTGGTAGATGGGAAGACGGAAATTAACGACGAAGCGCGGTTGGAATTGAAACGTGACTATCAACAATGTGTTGCTGATACTGAGGCCAATGTTCCGCCAAATAAAAAACAAGCGAAAGAAGTTTCCAACGATGAAGTGCGTTCGGAAGTTACAAATCCTAACGTTTCTGCAACAGAGCATGCACAAACCTTTCATGATATCAGTAGCCAACCGTTGGAATCTGAGAATGTTAGCCATGCAGAGTGTGGGGAACTGACATCTACTGGTTTGGAGAATTCTAGTTCTCATGATACCTTGAGTGATGAAGCTGGTGTTCGGAATAATGATAACGATAACGATAATGATCATAATAATACTTCTCTGAATGAGAAAGGCACGAGTAGTAGCGATGCAGTGTCCCGTGTTGTGATGGAAATCCCGAAGCATGCTAGTTCAACTGGTATTAGAAAGATTACTTTTAAGTTCAGTAAAAAGAAGGAGGATTATGATGACTATCAAACACCTGCTGTCTATACTGATGGCAATGACCATGGCAATGGCTATGGTTATGGCTATGGCTATGGCTATGGCTTTGGCTATGGCTATGGCTATGGTTATCATGGGGATGATGAATATTTGGCAAATGACGATTATAATAGTGGGTTGGTCGAGAGCTCGTATGGCAGGGGATATATTCCGTATGAGGATTCGGACTTGTATTCTGGCAATATGGAATTGAAAATGTCAAAGAAAGTAGTTCCCAACGCCTTCCCCAATAATGTGAAAAAGCTGTTATCAACCGGTATCCTTGATGGAGCTGCAGTGAAATATATTTACAACCCTGGAAAGGTTGAGCTCGACGGGATTATTGGTGATGGTGGATATCTGTGTGGCTGTTCAATGTGCAGTTACTCAAGAGTGCTCAGTGCCTATGAGTTCGAGCAGCATGCCGGTGCCAAGACTAGACATCCAAATAATCACATATTCCTAGAAAATGGAAAACCAATTTATAGCATAATACATGAAATAAAAACTGCTACAAACAGCACGCCAGATGAGGTTATAAAGAACGTGGCTGGTTCATCGATCAACGAGGAATCCTTCCAGGTTTGGAAAGAAAGTCTCATACAAAGCAACAGGAAGGTTCCAACTCATAAAAAATACAGCACAAAGTTTACTGGCATGCCTCATACACACAACAGTCAATCTATAGAAAGTGCGAGCTCCTTCTCATCTTCGCGTGCGCGAAATCATTTTGAGCAGCAAATGTATCTGAACCAGACAACTGATGAGTGGAAACGTGTTGTGAAAAAACCAAGCACCTACAGTTACTACCCAGGTATACCACAGAAGAGAAGTGCTGATGGTTGCACTAAGAAAAGGGACAACGATTTGCACAGGTTACTTTTTATGCCTAATGGCCTACCAGATGGTGCTGAGTTGGCTTACTATGTCAAAGGACAGAAATTACTTGGAGGTTACAAACAAGGAAATGGTATAGTCTGTGGTTGTTGTGATATAGAGATAAGCCCTTCACAGTTTGAAGCCCATGCTGGAATGGCGGCTAGACGTCAACCTTACCGCCACATATATACTTCCAATGGATTGACACTTCATGATATAGCTCTCTCTTTGGCAAATGGTCAAAACCTTACTACTGGAGATAGTGACGATATGTGTGCAGTATGTGGAGATGGAGGAGATTTGGTTCTTTGCAGTGGATGTCCTAGGGCCTTTCATGCAGTCTGCTTGGGTTTACACAGTGTACCAGATAGTGGTTGGCATTGTCTAAATTGTGAAGATAATACTGGTGATGGAAGAGGTGTGAGGCCAATCATGATACGGTTGACACGGGCTGATAAAGAACCAGAATATGAAGTGGGTGGATGTGTTGTTTGCAGGGAAAATGATTTCAGTGTTGATAAATTTGATGACCGAACAGTAATAATTTGTGATCAGTGTGAGAAGGAGTATCATGTTGGTTGTTTGCGGAACATTGGGCTATGCGAGTTGGAAGAGCTTCCCAAGGATAAGTGGTTTTGCTGTGACGACTGCAATCGAATATATGTGGCTCTACAGAATTCAGTTTCTGCTGGAGCAGAATGCATACCATCTTCCTTGTCGGAACTAATAACCAGGAAGCATGAGGACATGGGATTATGTACGTATGGAGACATGAATGATATCCAATGGAGAATTTTAAGTGGAAAAAGTCGTTATGCGGAGCATTTACCGTTACTTTCACGAGCTGCTGCAATTTTTCGAGAGTGTTTTGATCCCATCGTTGCAATATCTGGTCGTGACCTGATTCCTGTTATGGTATATGGGAGAAATATTTCTGGCCAAGAGTTCGGGGGAATGTATTGCATCGTTTTAATTGTGAATTCTGTTGTAGTCTCTGCCGGGCTTCTTAGGATTTTTGGCCGCAATATTGCCGAGCTTCCCCTGGTAGCTACTAGTAGAGAGCATCAAGGAAAAGGTTATTTTCAAGTGCTGTTCTCTTGCATAGAGAAGTTGTTGTCTTCTCTAAATGTAGAAAAGCTGGTGCTCCCTGCTGCAGGGGATGCAGAGTCAATCTGGACTAAGAAATTAGGCTTTCACAAGATGAGCGAAGATCAGTTATCTAAACATCTTAAAGAGGTGCAGCTCACCCTCTTCAACAAAACTTCAGTGCTGGAGAAGACAGTGCAGTTGGCGACAGAATGA 2715 0.4247 MGEEAVYVHALVDGKTEINDEARLELKRDYQQCVADTEANVPPNKKQAKEVSNDEVRSEVTNPNVSATEHAQTFHDISSQPLESENVSHAECGELTSTGLENSSSHDTLSDEAGVRNNDNDNDNDHNNTSLNEKGTSSSDAVSRVVMEIPKHASSTGIRKITFKFSKKKEDYDDYQTPAVYTDGNDHGNGYGYGYGYGYGFGYGYGYGYHGDDEYLANDDYNSGLVESSYGRGYIPYEDSDLYSGNMELKMSKKVVPNAFPNNVKKLLSTGILDGAAVKYIYNPGKVELDGIIGDGGYLCGCSMCSYSRVLSAYEFEQHAGAKTRHPNNHIFLENGKPIYSIIHEIKTATNSTPDEVIKNVAGSSINEESFQVWKESLIQSNRKVPTHKKYSTKFTGMPHTHNSQSIESASSFSSSRARNHFEQQMYLNQTTDEWKRVVKKPSTYSYYPGIPQKRSADGCTKKRDNDLHRLLFMPNGLPDGAELAYYVKGQKLLGGYKQGNGIVCGCCDIEISPSQFEAHAGMAARRQPYRHIYTSNGLTLHDIALSLANGQNLTTGDSDDMCAVCGDGGDLVLCSGCPRAFHAVCLGLHSVPDSGWHCLNCEDNTGDGRGVRPIMIRLTRADKEPEYEVGGCVVCRENDFSVDKFDDRTVIICDQCEKEYHVGCLRNIGLCELEELPKDKWFCCDDCNRIYVALQNSVSAGAECIPSSLSELITRKHEDMGLCTYGDMNDIQWRILSGKSRYAEHLPLLSRAAAIFRECFDPIVAISGRDLIPVMVYGRNISGQEFGGMYCIVLIVNSVVVSAGLLRIFGRNIAELPLVATSREHQGKGYFQVLFSCIEKLLSSLNVEKLVLPAAGDAESIWTKKLGFHKMSEDQLSKHLKEVQLTLFNKTSVLEKTVQLATE* 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2728 904 MobiDBLite consensus disorder prediction 97 111 - -
Mal1g2728 904 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 739 891 IPR000182 GO:0016407
Mal1g2728 904 Gene3D - 730 897 - -
Mal1g2728 904 MobiDBLite consensus disorder prediction 112 128 - -
Mal1g2728 904 ProSitePatterns Zinc finger PHD-type signature. 563 602 IPR019786 -
Mal1g2728 904 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 788 874 IPR016181 -
Mal1g2728 904 SUPERFAMILY FYVE/PHD zinc finger 558 604 IPR011011 -
Mal1g2728 904 MobiDBLite consensus disorder prediction 97 141 - -
Mal1g2728 904 CDD NAT_SF 792 853 - -
Mal1g2728 904 Pfam Tify domain binding domain 496 545 IPR032308 -
Mal1g2728 904 Pfam Tify domain binding domain 291 342 IPR032308 -
Mal1g2728 904 ProSiteProfiles Zinc finger PHD-type profile. 630 691 IPR019787 -
Mal1g2728 904 SMART PHD_3 562 603 IPR001965 -
Mal1g2728 904 SMART PHD_3 632 689 IPR001965 -
Mal1g2728 904 ProSiteProfiles Zinc finger PHD-type profile. 560 605 IPR019787 -
Mal1g2728 904 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 15 900 - -
Mal1g2728 904 Pfam PHD-finger 562 603 IPR019787 -
Mal1g2728 904 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 555 609 IPR013083 -
Mal1g2728 904 MobiDBLite consensus disorder prediction 37 68 - -
Mal1g2728 904 ProSitePatterns Zinc finger PHD-type signature. 633 688 IPR019786 -
Mal1g2728 904 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 631 691 IPR013083 -
Mal1g2728 904 PANTHER AUTOIMMUNE REGULATOR 15 900 - -
Mal1g2728 904 SUPERFAMILY FYVE/PHD zinc finger 629 686 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2728 Mal-Chr1 38470744 38479849 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2728 19 904 PHD Transcription Factor Family AT3G53680 51.158 0.0 866
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mal1g2728 TDBD 1.1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2728 - - gmx:100808999 1439.09