Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2721 ATGGCGGCATCACGGCGGCTCCGGGACCTTCAATCCCAACCCGGCAACAAGATCTGCGTCGATTGCTCACAGAAGAATCCACAGTGGGCTTCAGTCTCCTACGGCATCTTCATGTGTTTGGAATGTTCCGGCAAGCACCGTGGCCTCGGCGTTCACATCTCATTCGTCCGATCCGTCACCATGGATGCTTGGTCTGAAATCCAAATCAAAAAAATGGAAGCTGGTGGTAACGACAATCTCAACGCTTTCCTTGCGAGGTATTCGATTCCGAAGGAAACGGATATTGTGACGAAGTATAACACCAACGCTGCTTCGGTTTATCGTGATCGGATTCAGGCTTTGGCGGATGGTCGGACGTGGCGTGATCCGCCGGTTGTTAAGGAGAATTTAGGTTCTAAGGGAAGGCCGCCGCTGGGGCAGAGTCGCCGGAGTGATTCCGGTTGGGATGATTGGGATAGAGAAGGAGGTTCGGGAAGTGATGTGAGGAGTAAGTCGACGGGGGATTTTAGGAGTTTGAACGGCGGTGGTGCGCCGGCGAGATCGAGGTCGACGGAGGATATCTATACGCGGTCGCAATTGGAGGCTTCCGCGGCGGGTAAAGAAGGATTTTTTGCGAAGAAGATGGCGGAGAATGAGTCGAGGCCCGAAGGACTTCCACCGTCGCAGGGTGGGAAGTATGTTGGGTTTGGATCTAGTCCGATGCCTTCACAGAGGAGTAATCCGCCGCAAAGCGATTATTTCTCAGTTGTTTCGCAGGGGATTGGTAAGTTGTCATTGGTTGCTGCTTCTGCTGCTAATGTTGTTCAGGCTGGCACAAAAGAGATCACTTCTAAGGTCAAGGACGGCGGTTATGATCAAAAGGTCAATGAAACTGTCACTGTTGTCACTCAAAAGACATCAGAGATTGGTCAAAGGACATGGGGTTTAATGAAAGGGGTCATGGCTTTGGCTTCACAGAAGGTTGAGGAGTACACTAAAGAAAACTCAAATTCTACTACTAATAGCTGGCAACGAAATGAGAATGATAGAAATGGCTACTATCAGGATTTCAATCAAGGGAACAAAGTAGGTAATTCTTCTACTGGAAGAGAACAATCTTCATCAGGGCAATACAAAACTCAGAGCTCAAATTCTTGGGACGATTGGGGCCAAAAAGATAGTTGGAAGGGAGAACCAACTAATAAAGGATCAACTCCTTATTCATCTGGTGGTCAGTCTGGTACTCACAATACCAGCTCTTGGGATGATTGGGACCACAAAGATTCTAGGAAGGAAGAACCTGCTAAAGCATCGGCTCCCCACAATAATGATGCTGGTTGGGCTGGCTGGGATAATACCAAAGATGATGGATTTGATAACTTTTATGAAGGTGCATCTACTAAGAAAGGTGTTGGACATAATGGGAAATCAGACGATGCTTGGACAGGAGGTGGCTTTCTCTAA 1443 0.4823 MAASRRLRDLQSQPGNKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGVHISFVRSVTMDAWSEIQIKKMEAGGNDNLNAFLARYSIPKETDIVTKYNTNAASVYRDRIQALADGRTWRDPPVVKENLGSKGRPPLGQSRRSDSGWDDWDREGGSGSDVRSKSTGDFRSLNGGGAPARSRSTEDIYTRSQLEASAAGKEGFFAKKMAENESRPEGLPPSQGGKYVGFGSSPMPSQRSNPPQSDYFSVVSQGIGKLSLVAASAANVVQAGTKEITSKVKDGGYDQKVNETVTVVTQKTSEIGQRTWGLMKGVMALASQKVEEYTKENSNSTTNSWQRNENDRNGYYQDFNQGNKVGNSSTGREQSSSGQYKTQSSNSWDDWGQKDSWKGEPTNKGSTPYSSGGQSGTHNTSSWDDWDHKDSRKEEPAKASAPHNNDAGWAGWDNTKDDGFDNFYEGASTKKGVGHNGKSDDAWTGGGFL* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2721 480 MobiDBLite consensus disorder prediction 210 244 - -
Mal1g2721 480 MobiDBLite consensus disorder prediction 413 431 - -
Mal1g2721 480 MobiDBLite consensus disorder prediction 145 159 - -
Mal1g2721 480 CDD ArfGap_ArfGap1 3 117 - -
Mal1g2721 480 ProSiteProfiles ARF GTPase-activating proteins domain profile. 4 120 IPR001164 GO:0005096
Mal1g2721 480 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 1 395 - -
Mal1g2721 480 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 398 480 - -
Mal1g2721 480 MobiDBLite consensus disorder prediction 323 480 - -
Mal1g2721 480 PRINTS HIV Rev interacting protein signature 35 52 IPR001164 GO:0005096
Mal1g2721 480 PRINTS HIV Rev interacting protein signature 16 35 IPR001164 GO:0005096
Mal1g2721 480 PRINTS HIV Rev interacting protein signature 56 77 IPR001164 GO:0005096
Mal1g2721 480 MobiDBLite consensus disorder prediction 323 383 - -
Mal1g2721 480 SUPERFAMILY ArfGap/RecO-like zinc finger 5 112 IPR037278 -
Mal1g2721 480 MobiDBLite consensus disorder prediction 122 187 - -
Mal1g2721 480 Gene3D Arf GTPase activating protein 1 129 IPR038508 -
Mal1g2721 480 MobiDBLite consensus disorder prediction 390 412 - -
Mal1g2721 480 Pfam Putative GTPase activating protein for Arf 5 102 IPR001164 GO:0005096
Mal1g2721 480 SMART arf_gap_3 1 120 IPR001164 GO:0005096
Mal1g2721 480 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 398 480 IPR044519 GO:0005096|GO:0016192
Mal1g2721 480 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 1 395 IPR044519 GO:0005096|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2721 Mal-Chr1 38370101 38372951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2721 5 87 C2H2 Transcription Factor Family AT4G05330 48.810 8.18e-23 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2721 K12492 - gmx:100806519 777.704