Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2704 ATGAATTACTATGTTCCAGATTTCGATATTCATATGGAAGATGAAGAAGAATACCCTATGCATCTCTCAAAGAAACCTTCCACGCAACAAGATGATGAGATCATGGAACTATTATGGCAAAACGGACAAGTCGTGATGCAAAGCCAAAACCACCGCCAATTCAGAAAACCGCCGTCACCGGCAACTGCAACCACCGCCAATCGCGTGATTCCTGATCATAGAGAGATTCGATCAACCGATGCAGAGAATTACATGAATCAACACTTGTTCATGCAAGAAGATGAAATGGCATCGTGGCTTTTCGATTCAATGAATGAAGTAGAAGATCCTCCTTTCAACCGTCACGATTTCAGTTCAGAAACACTTTTTCATCCATCCGCTGGAAGCGCCGGTCAGAAAAACGGCGCTGGCGCTGGCGGTGTTATACAAGCTACTGCTCGTGAATCGGAGTTTGTTCAGCAATCGAGACCGGCGGCGGTGGCAGCTTCTCGGCCTCCGATTCATCCGGCGAGGAAGCCGGAGATGACGGTGAATAGAACACAGACTAATTTTGCGCATTTCGCGAACCAAAGCAATGCGAGGAATGAACCAGGTGCGTCTTCGAGTTCGATGATTGCGACGGGAAGAGAATCAACGGTGGTGGATTCGTGTGATACGCCGATCATGACGGCTAAGAATTATGCGGTTTCGAGATTCTCGGAAACGATCAGAAGCACGACGGCGGAGACTGGATGTGTGAGTGTGAGCACCACCGGAAAAGCGGCGACGACGTCGGTAGGTGGAAGGGAGACGACGACGTTGGATATGACGGTTACGTCATCGCCTGGATGCTCTAGCGGGAGTGCTGAACCGGTTCATAGAGAACCGGAGTTGGACCGGAAAAGGAAGGGACGTGAACCGGATGAATCTGAGTTTCAGAGTGAGGATGTCGATTTTGAATGCCGGGAAGCAAAAAAACAACACCGTGGATCTACATCTGCAAAGAGATCACGTGCTGCAGAGGTTCATAATCTCTCAGAGAGGAAGCGTCGAGATAGAATTAACGAAAAGATGAAAGCTTTGCAAGAACTTATACCGCGGTGCAACAAGTCTGACAAAGCTTCAATGTTGGATGAAGCAATCGAATACCTGAAGTCATTGCAGTTACAAGTGCAGATGATGTCCATGGGATGTGGCATGGTACCTATGATGTTTCCTGGAATTCAGCAATATATGCCAGCCATGGGAATGGGGATGGGAATGGGTTTGGGGATGGAAATGGGGATGGGAATGAATAGACCAGTGATGCCATTTCCTAATATGTTACCTAATTCTCCTTTGCCACCAGCAGCAACAGTAGCTGGTCATTTTGGACCAAGGTTCGCTATGCCTCCTTTCCATATGCCACATGTTCCTGCAACCGCACCTGATTCATCATCTAGAATGCAAGCAGAAAATCAATCAGATAACCCCCTTAACTCCCTTGGTTCTCTGCCTCCAGATCAATCACGCATCCCAAACCCAAACTTCACAGATCCTTACCAGCAATTCCTCGGTCCCCACCAGGTGCAGCAATTAATGCAGGCAATGAACCAGCAAAATGTACACAGGCCAGGTACCAGTGGGAACCAAGATAATCCAGAAAAGCATCATTCAGGTTAG 1641 0.479 MNYYVPDFDIHMEDEEEYPMHLSKKPSTQQDDEIMELLWQNGQVVMQSQNHRQFRKPPSPATATTANRVIPDHREIRSTDAENYMNQHLFMQEDEMASWLFDSMNEVEDPPFNRHDFSSETLFHPSAGSAGQKNGAGAGGVIQATARESEFVQQSRPAAVAASRPPIHPARKPEMTVNRTQTNFAHFANQSNARNEPGASSSSMIATGRESTVVDSCDTPIMTAKNYAVSRFSETIRSTTAETGCVSVSTTGKAATTSVGGRETTTLDMTVTSSPGCSSGSAEPVHREPELDRKRKGREPDESEFQSEDVDFECREAKKQHRGSTSAKRSRAAEVHNLSERKRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPGIQQYMPAMGMGMGMGLGMEMGMGMNRPVMPFPNMLPNSPLPPAATVAGHFGPRFAMPPFHMPHVPATAPDSSSRMQAENQSDNPLNSLGSLPPDQSRIPNPNFTDPYQQFLGPHQVQQLMQAMNQQNVHRPGTSGNQDNPEKHHSG* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2704 546 MobiDBLite consensus disorder prediction 310 344 - -
Mal1g2704 546 Pfam Helix-loop-helix DNA-binding domain 335 381 IPR011598 GO:0046983
Mal1g2704 546 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 331 380 IPR011598 GO:0046983
Mal1g2704 546 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 1 545 IPR031066 -
Mal1g2704 546 SMART finulus 337 386 IPR011598 GO:0046983
Mal1g2704 546 MobiDBLite consensus disorder prediction 285 303 - -
Mal1g2704 546 MobiDBLite consensus disorder prediction 461 546 - -
Mal1g2704 546 Coils Coil 337 357 - -
Mal1g2704 546 MobiDBLite consensus disorder prediction 469 540 - -
Mal1g2704 546 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 545 - -
Mal1g2704 546 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 329 397 IPR036638 GO:0046983
Mal1g2704 546 MobiDBLite consensus disorder prediction 252 344 - -
Mal1g2704 546 MobiDBLite consensus disorder prediction 252 280 - -
Mal1g2704 546 CDD bHLH_AtPIF_like 331 394 - -
Mal1g2704 546 Gene3D - 326 389 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2704 Mal-Chr1 38003396 38015572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2704 1 386 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G20180 39.900 1.49e-60 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal1g2704 HLH 1.1e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2704 - - mtr:MTR_1g069155 926.006