Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2702 ATGGTTGAACTTGATGATTCACCCTCTTCACCTTCATCACCACTACAACAACCATTAATTTCTTCAAGTGAAGAAGAAAAAAGAGGAAAAAAGAGAGAAAGAGAAACCAACAACAATAACAACAATGTTAACAACACTAACACTAAGCATCCAGTTTATAGAGGAGTTAGAATGAGAACATGGGGAAAATGGGTATCTGAAATCCGCGAACCACGGAAAAAAAACCGAATTTGGCTTGGAACATTCGCAACTGCTGAAATGGCAGCACGTGCACACGATGCAGCTGCACTTACTATAAAAGGTTCATCAGCAATCCTTAACTTCCCCGAACTCTCAGCTTTACTTCCTCGTCCAGCTTCGAACTCTCCAAGAGATGTTCAAGCCGCCGCAGTTAAAGCGGCTTCAATGGCTCCTCCTCCTCCTGCTCCTCCTTCTCCTGCACCATCATCTTCATCCTCCTCCTCCTCCGACTTATCTTCTTCCTCGACACCGGAGGATCTTGGTGAGATTGTTGAGTTACCAAGACTAGGAACATGTTTTGAGTCATTAGACCCCGAGTTTGTGTTTTTTGACCCGGTTGATTATTGGTATAATAGCAATAATAGCATTTATGATAATGAAGAAGAGAATGGTGGTTATGGTGATGGTGGATATTTGAACATGATATCAATGCATGACCCAGAAAACACGCTACTTTCATTGTGGTCTTGA 711 0.4233 MVELDDSPSSPSSPLQQPLISSSEEEKRGKKRERETNNNNNNVNNTNTKHPVYRGVRMRTWGKWVSEIREPRKKNRIWLGTFATAEMAARAHDAAALTIKGSSAILNFPELSALLPRPASNSPRDVQAAAVKAASMAPPPPAPPSPAPSSSSSSSSDLSSSSTPEDLGEIVELPRLGTCFESLDPEFVFFDPVDYWYNSNNSIYDNEEENGGYGDGGYLNMISMHDPENTLLSLWS* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2702 236 Gene3D AP2/ERF domain 52 110 IPR036955 GO:0003700|GO:0006355
Mal1g2702 236 MobiDBLite consensus disorder prediction 1 52 - -
Mal1g2702 236 Pfam AP2 domain 51 101 IPR001471 GO:0003700|GO:0006355
Mal1g2702 236 SUPERFAMILY DNA-binding domain 52 109 IPR016177 GO:0003677
Mal1g2702 236 MobiDBLite consensus disorder prediction 149 166 - -
Mal1g2702 236 PRINTS Ethylene responsive element binding protein signature 53 64 IPR001471 GO:0003700|GO:0006355
Mal1g2702 236 PRINTS Ethylene responsive element binding protein signature 75 91 IPR001471 GO:0003700|GO:0006355
Mal1g2702 236 CDD AP2 53 111 IPR001471 GO:0003700|GO:0006355
Mal1g2702 236 ProSiteProfiles AP2/ERF domain profile. 52 109 IPR001471 GO:0003700|GO:0006355
Mal1g2702 236 MobiDBLite consensus disorder prediction 23 37 - -
Mal1g2702 236 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 17 222 - -
Mal1g2702 236 MobiDBLite consensus disorder prediction 1 22 - -
Mal1g2702 236 MobiDBLite consensus disorder prediction 119 166 - -
Mal1g2702 236 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 17 222 - -
Mal1g2702 236 SMART rav1_2 52 115 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2702 Mal-Chr1 37956211 37956921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2702 12 195 AP2-EREBP Transcription Factor Family AT5G11590 54.822 1.13e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal1g2702 AP2 3.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2702 K09286 - gmx:100784134 194.897