Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2679 ATGGCTAGCAGCAGCAACTCTTCTTCAGCTCTTGTGACTTCTTCAAGAAGAAACTATTATGATGTGTTTGTCACCTTTAGAGGTGAAGACACTCGCAACAATTTCACTGATTATCTTTTTGATGCTCTTGAAACAAAAGGCATTTTTGCATTTAGGGATAACACTAATCTTCAAAAAGGTGAATCTATAGGGCCTGAGCTCCTTCGAGCAATCGAAGGATCTCAGGTTTTCGTTGCGGTCTTCTCAAGGAACTATGCTTCCTCAACATGGTGCTTGCAGGAATTAGAAAAGATATGTGATTGCGTTCATGTATCAGGAAAACATGTTCTTCCTGTTTTCTATGATGTTGATCCTTCTGAGGTGCGAAAGCAAAGTGGGATTTATGGTGAAGCTTTTGTCAAACATGAACAAAAATTCCAACAAGACTCTCAAATTGTGTCAAGATGGAGGGAAGCTCTCAAACAAGTGGGGAGTATCTCTGGTTGGGACCTACGTGATAAGCCACAATCAGCTGAGACTAAAAAGATTGTTCAAAAGATAATGAATATATTGGAGTGCAATTCTTCATGTGTTTCAAAAGATTTAGTTAGGATGAATTCCCCTATAAAAGCATTACAAAATCATTTGCTTTTGGACTCGGTTGATGGTGTTCATGCTATAGGAATTTGTGGAATGGGAGGAATAGGGAAAACAACCCTTGCTATGGCTTTATACGACCAAATATCTCACCGATTTAGTGCATCTTGTTTTATTGATGATGTAAGCAAAGTTTTTAGATTACATGATGGTCCACTCGATGCACAAAAGCAAATCTTACTTCAAACTCTCGGCATAGAACACCATCAAATAAGCAATCGTTACACCGCGACTAATTTGATACGAAGAAGACTAGGTCGTGAAAGGGCCCTTCTGATTCTTGATAATGTTGATCAAGTTGAACAACTTGAAAAAATAGCTGTGCATCGTGAATGGTTAGGTGCAGGTAGTAGAATCATTATCATTTCGAGAGATGAGCATGTATTGAAAGAGTATGGAGTTGATGTAGTTTACAAAGTTCCACTTTTGAATGAGACCGAAGCTCACATGTTATTTTGTCGAAAAGCTTTCAAAGCTGAAAAAATAATTATGAGTAATTATCAAAATTTGGCTTATGAGATACTGGATTATGCTAAAGGTTTACCACTAGCAATTACAGTATTGGGCTCATTTTTGTCTGGTCGTAATGTGACTGAATGGAAGAGTGCATTGGAAAGATTGAGAGAAAATCCAAATAAAGATGTCATGAATGTGCTGCAATTAAGTTTCGATGGGCTAGAGGAGACCGAAAAAGAAATATTTCTTGATATTGCTTGTTTTTTCGACCGTTGGTCAGAGAAAGAAGTTAAAAACATTCTAAATTGTTGTGGATTTCATGCTGATATTGGATTAAGAGTTCTCATTGATAAATCACTTATAAGCATTTCTGATTCAAAGATTGATATTCATTCTTTGTTGAAAGAGCTAGGCAGAAAAATTTTGCAAGAAAATTCAAGCAAAGAGCAAAGAAAGTGGAGCAGGTTGTCGTCCATAAAAGAACTCTACAATGTTGTGATGGAGAAAATGGAAAATCATGTTGAAGCCATAGTTTTGAATGCTGAAAAGGAATATATGAGCTTTGAACACTTGTCGAAAATGAGTCATCTTAGATTGCTCATCATCGGAAACTATAGCTCAGAAGGCCCAAGTTGTCTTTCGAACGAATTAAGATATGTTGACTGGTCTAAATATCCTTTCATGTATTTGCCATCAAATTTTCAACCCAATCAACTAGTTGAATTGATTTTGAGGAATAGCAGCATCAAACAACTATGGAGAAACAAGAAGTATCTTCCCAATCTGAGAAAATTGGATGTAAGTGACTCCAAAAAGCTAGTAAAGATAATAGATTTTGGAGAGTTCCCGAATCTTGAGTGGTTAAATTTGAAAGGATGTGAAAACCTTGTGGAGTTGGATCCATCTATTGGACTTCTAAGAAAGCTTGTTTACTTGAAGTTAGACTATTGCTATAATCTAGCAAGCCTACCCAACAATATATTCGGTCTTAGTTCTCTTGAAGATCTTAATATGTGTGCCTGTTCCAAAGTGTTTAACAATTCAAGGCATTTGAAAAAGTTTGGTACGTCCTCGGAAAAGAAGAAGAAAAACGATATAAGTGAATGTGCATCACATTGTCGATCAACGTCCTATTTCTCCGAATGGATGTTGTTGCCTCACGATTCATCGTTTTCAGCTCCCATAACACACACATATTTGTTGCCTTCCTTGCGTAGTTTATATTGTTTGCGTAACATTGACATTAGCTTTTGCCATCTAAGCCTAGTTCCTGATGCAATTGAATGTTTACATTGGCTAGAAAGATTAAACTTAGGGGGAAACAATTTTGTGACACTACCTAGCCTGAGCAAGCTTTCCAATCTTCTATATTTAAATTTGACTCATTGCAAGTTGTTGGAATCTTTGCCTCGACTTCCTTCTCCTACAACTATTGGGCGGGATCATCGTGAGAACAAAGATGATTGGATTACAGGATTGATCATTTTCAACTGTCCAGAATTGGGTGAGAGGGAACGTTGCAGTAGCATGACATTTTCATGGATGACACAATTCATTAAGGCAAACCCACAAGCCAACCCTCCATATTTTGATAACATTTATATTGTTACTCCCGGAAGTGAAATACCAAGTTGGATCAACAATAAGAGCATGGGTGGTTCAATACAAATCGACGAATCTCCTATTATGCATGACAATAACAATAATATCATTGGCTTTGTAAGTTGTGTAGTATTTTCCATGGAACCTCAAGATCCAACAATGTTAAATTGTTTTCCATTCTTTGTCAATATGAAAATCGGTAGGAAGAGGATCCGTACCAATGTTCCAGTAATTATCGATAAGGATCTTATTACGACCAAATCAAGTCACATATGGCTAATCTACTTCCCCCGAGAGTTCTATGATGTTTATGGATCTATCAGTGTTAAATGTTATAAGGGTGAAGTAGTGGGTTTCAAGGTAAAGAGTTGCGGGTATCGTTGGGTAAGTAAACAAGACCTACAAGAGTTCAACTTAACAATGATGAATCACGAAAATTCCTTGGCTCAAAAGTGCAAGATTTTGGAAATCGAAGATGAGACACAATCGCAACCTCAGCCAAAACCATTCATCTCATTAAATAAAGAGTAG 3225 0.3693 MASSSNSSSALVTSSRRNYYDVFVTFRGEDTRNNFTDYLFDALETKGIFAFRDNTNLQKGESIGPELLRAIEGSQVFVAVFSRNYASSTWCLQELEKICDCVHVSGKHVLPVFYDVDPSEVRKQSGIYGEAFVKHEQKFQQDSQIVSRWREALKQVGSISGWDLRDKPQSAETKKIVQKIMNILECNSSCVSKDLVRMNSPIKALQNHLLLDSVDGVHAIGICGMGGIGKTTLAMALYDQISHRFSASCFIDDVSKVFRLHDGPLDAQKQILLQTLGIEHHQISNRYTATNLIRRRLGRERALLILDNVDQVEQLEKIAVHREWLGAGSRIIIISRDEHVLKEYGVDVVYKVPLLNETEAHMLFCRKAFKAEKIIMSNYQNLAYEILDYAKGLPLAITVLGSFLSGRNVTEWKSALERLRENPNKDVMNVLQLSFDGLEETEKEIFLDIACFFDRWSEKEVKNILNCCGFHADIGLRVLIDKSLISISDSKIDIHSLLKELGRKILQENSSKEQRKWSRLSSIKELYNVVMEKMENHVEAIVLNAEKEYMSFEHLSKMSHLRLLIIGNYSSEGPSCLSNELRYVDWSKYPFMYLPSNFQPNQLVELILRNSSIKQLWRNKKYLPNLRKLDVSDSKKLVKIIDFGEFPNLEWLNLKGCENLVELDPSIGLLRKLVYLKLDYCYNLASLPNNIFGLSSLEDLNMCACSKVFNNSRHLKKFGTSSEKKKKNDISECASHCRSTSYFSEWMLLPHDSSFSAPITHTYLLPSLRSLYCLRNIDISFCHLSLVPDAIECLHWLERLNLGGNNFVTLPSLSKLSNLLYLNLTHCKLLESLPRLPSPTTIGRDHRENKDDWITGLIIFNCPELGERERCSSMTFSWMTQFIKANPQANPPYFDNIYIVTPGSEIPSWINNKSMGGSIQIDESPIMHDNNNNIIGFVSCVVFSMEPQDPTMLNCFPFFVNMKIGRKRIRTNVPVIIDKDLITTKSSHIWLIYFPREFYDVYGSISVKCYKGEVVGFKVKSCGYRWVSKQDLQEFNLTMMNHENSLAQKCKILEIEDETQSQPQPKPFISLNKE* 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2679 1074 Pfam C-JID domain 902 1032 IPR045344 -
Mal1g2679 1074 Pfam NB-ARC domain 201 429 IPR002182 GO:0043531
Mal1g2679 1074 SUPERFAMILY L domain-like 549 843 - -
Mal1g2679 1074 PRINTS Disease resistance protein signature 621 637 - -
Mal1g2679 1074 PRINTS Disease resistance protein signature 390 404 - -
Mal1g2679 1074 PRINTS Disease resistance protein signature 219 234 - -
Mal1g2679 1074 PRINTS Disease resistance protein signature 296 310 - -
Mal1g2679 1074 Gene3D Ribonuclease Inhibitor 754 848 IPR032675 -
Mal1g2679 1074 Pfam TIR domain 20 181 IPR000157 GO:0007165
Mal1g2679 1074 Gene3D - 354 439 IPR042197 -
Mal1g2679 1074 ProSiteProfiles Leucine-rich repeat profile. 796 817 IPR001611 GO:0005515
Mal1g2679 1074 Gene3D - 188 349 IPR027417 -
Mal1g2679 1074 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 449 IPR027417 -
Mal1g2679 1074 Gene3D Ribonuclease Inhibitor 486 731 IPR032675 -
Mal1g2679 1074 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 634 835 - -
Mal1g2679 1074 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 21 625 - -
Mal1g2679 1074 SMART till_3 19 159 IPR000157 GO:0007165
Mal1g2679 1074 ProSiteProfiles TIR domain profile. 18 184 IPR000157 GO:0007165
Mal1g2679 1074 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 162 IPR035897 -
Mal1g2679 1074 SUPERFAMILY "Winged helix" DNA-binding domain 426 515 IPR036390 -
Mal1g2679 1074 Gene3D - 13 187 IPR035897 -
Mal1g2679 1074 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 634 835 IPR044974 GO:0006952
Mal1g2679 1074 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 625 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2679 Mal-Chr1 37519293 37523067 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2679 20 800 WRKY Transcription Factor Family AT4G12020 29.383 3.18e-74 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2679 - - mtr:MTR_6g488300 1516.13