Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2677 ATGTCTTGTAGCAGCAACTCTTCTTTAGCTCTTGTGGCATCTTCAAGAAGAAATTATTATGATGTTTTTGTCACCTTTAGAGGTGAAGACACTCGCAACAATTTCACTGATTATCTATTTGATGCTCTTGAAACAAAAGGCATTTATGCATTCAGGGATGATACTAGTCTTCAAAAAGGTGAATCTATAGGACCTGAGCTCCTTCGAGCAATAGAAGGATCTCAGGTTTTCGTTGCGGTCTTCTCAAGGAACTATGCTTCCTCAACATGGTGCTTGCAGGAATTAGAAAAGATATGTGAATGTGTTCGTGTATCAGGAAAACACGTCCTTCCTATTTTCTTTGATGTTGATCCTTCTGAAGTGAGAAAGCAAAGTGGGATTTTTAGTGAAGCTTTTGTCAAACATGAACAAAGATTTCAACAAGACTCTCAGATGGTGTCAAGATGGAGGGAAGCTCTAAACCAAGTGGGGAGTATATCTGGTTGGGACCTACGTGATAAGCCACAATCTGTAGAGACTAAAAAGATTGTTCAAAAGATAATGAATATATTGGAGTGCAAATCTTCATGTGTTTCAAAAGATTTAGTTGCGATTAATTATCCTATAGAAGCATTAAAAGATCATTTACTCTTGGACTCAATCAATGGTGTTCATGCTATAGGAATTTGTGGGATGGGAGGAATAGGGAAGACAACCCTTGCTATGGCTTTATATGACCAAATATCTCATCAATTTAGTGCATCGTGTTTCATTGATGATGTAAGCAAACTTTATAGATTACATGATGGTCCACTCGATGCACAAAAGCAAATCCTTCTTCAAACTCTCGGCAAAGAACACCATGAGATATGCAATCATTATAGCGCAACTAATTTGATACGAAGTAGGCTATGTCATGAAAGGGTCCTTCTGATTCTTGATAATGTTGATCAAGTTGGACAACTTGAAAAAATTATTGTGCATCATGAATGGTTAGGTGCAGGTAGTAGAATTATTATCATTTCTAGAGATGAGCATATATTGAAAGAGTATGGAGTGGATGTAGTTTACAAAGTTCCACTTTTGAATCGTACTGAATCTCACAAGTTATTTTGTCGAAAAGCTTTCAAACTTGAGAAAATTATTATGAGTAATTATCAAAATTTGGCATATGAAATACTTGATTATGCTGAAGGTCTACCGCTGGCAATTACAGTATTGGGCTCATTTTTGTTCGGTCGTAATGTGACTGAATGGAAGAGTGCATTGGCTATATTGAGAGAAAGTCCAAATAAAGATATCATGAATGTGCTGCAATTAAGTTTTGATGGGTTAGAGGAGACAGAAAAAGAAATATTTCTTCATATTGCTTGTTTTTCAAGCTTCAGCTCGGAGAAATATTTCAAAAATATTCTAAATTGTTGTGGATTTCATGCTGATATTGGATTAAGAGTTCTCATTGATAAATCACTTATACGCATTGAGGATACAAGGATTGAAATGCATTCTTTGTTGAAAGAGCTAGGCAGAAAAATTGCGCTCGAGCAAAGAAAGTGGAGCAGGGTGTGGTCGAAAAAACAACTCTACGACGTTATGATGGAGAAAATGGAAAAGCATGTTGAAGCCATAGTTTTGAATGCTGCTGAAGAGATTGATATGAACGTTGAACACTTGTCAAAAATGAGTAATCTTAGATTGCTCATCATCTTCAACTATAGTGGAAATATCTCAGAAAGCCCAAGTTGTCTATCAAACAGATTAAGATATTTTGAGTGGCATGAATATCCTTTCAAGTATTTGCCATCAATTTTTCAGCCAAGTGAACTTGTTGAATTGATCTTGAAGAGTAGCAACATCAAACAACTATGGAAAAGCAATAAGTATCTACCCAATTTGAAAACTTTGGATTTAAGGAACTCCAAAAAATTAGTGAAGATACTAAATTTTAAAGAGTTCCCGAATCTTGAGTGGTTAAATTTGGAAGGATGTGAAAACCTTGTGGAGTTGGATCCATCTATTGGACTTCTAAGAAAGCTTGTTTACTTGAAGTTAGACTTTTGCTATAATCTATTAAGCATACCCAACAACATATTCAATCTCAGCTCTCTTGAAGATCTACATATGAGTGGTTGTTCCAAAGTGTTTAACAATTCAAGGCATTTGAAAAAGTCTGATATAAGTGAAAGTGCAACACAATACCGATCAACGTCCCCTGTCTTAAATTTGATCATGTTGCCTCACGATTCATCGTTTTCGGCTCCCACAACACACACATATTTGTTGCCTTCCTTGCATAGTTTATATTGTTTGCGTAACGTTGACATTAGTTTTTGCGGTCTAAGCCAAGTTCCTGATGCAATTGAATGTTTAAAATGGCTAGAAAGATTAAACTTGGGGGGAAACAATTTTGTGAAACTACCTAGCCTGAGGAAGCTTTCCAAACTTGTATATTTAAATTTGGAGCATTGCAGATTGTTGGAATCTTTACCACAACTTCCTTCTCCTGCCACTATTGGGCGGGAATATCGTGAGAACAAAGATTGTTGGATTACAGGATTGGTCATTTTTAATTGTCCAAAATTGGTAGAGAGGGAACGTTGCAATAGCATGACATTTTCATGGATGACACAATTCATTAAGGCAAACCCTCAATCCCACCCTGCCTATTTTGATAAGATTCATATTGTTACTCCAGGAAGTGAAATACCAAGTTGGATCAACAATCGGAGCATGGGTGGTTCAATACCAATAGACGAATCTCCTGTTATGCATGACAATAACAATAATATCATTGGCTTTGTAAGTTGTGTAGTATTTTCCATGGCACCTCAAGATCAAACAATGATAGGATGTTTTCCATTGTTGGTCTATTTGAAAATGGGTAGTAAGAGGAATCGTAGTAGGCTTCCACTAATTATCGATAGAGATCTTATTACAACCAAATCAAGTCACCTATGGCTAATCTACTTCCCCCGAGAGTCCTATGATGTTTTTGGAACTATCCATGTTCAATGTATTATGGGTGATATTGTGGGTTTGGAGGTGAAGAGTTGCGGGTATCGTTGGGTATGTAAACAAGACCTACAAGACTTCAACTTAACAATGATGAATCACGAAAATTCCTTGGCTCAGAAGGGCAAGATTTTGGAAATTGAACATGAGACACAACCGCAACGTCAACCAAAATCATTCATCTCATCAAATAAAGATTAG 3192 0.3647 MSCSSNSSLALVASSRRNYYDVFVTFRGEDTRNNFTDYLFDALETKGIYAFRDDTSLQKGESIGPELLRAIEGSQVFVAVFSRNYASSTWCLQELEKICECVRVSGKHVLPIFFDVDPSEVRKQSGIFSEAFVKHEQRFQQDSQMVSRWREALNQVGSISGWDLRDKPQSVETKKIVQKIMNILECKSSCVSKDLVAINYPIEALKDHLLLDSINGVHAIGICGMGGIGKTTLAMALYDQISHQFSASCFIDDVSKLYRLHDGPLDAQKQILLQTLGKEHHEICNHYSATNLIRSRLCHERVLLILDNVDQVGQLEKIIVHHEWLGAGSRIIIISRDEHILKEYGVDVVYKVPLLNRTESHKLFCRKAFKLEKIIMSNYQNLAYEILDYAEGLPLAITVLGSFLFGRNVTEWKSALAILRESPNKDIMNVLQLSFDGLEETEKEIFLHIACFSSFSSEKYFKNILNCCGFHADIGLRVLIDKSLIRIEDTRIEMHSLLKELGRKIALEQRKWSRVWSKKQLYDVMMEKMEKHVEAIVLNAAEEIDMNVEHLSKMSNLRLLIIFNYSGNISESPSCLSNRLRYFEWHEYPFKYLPSIFQPSELVELILKSSNIKQLWKSNKYLPNLKTLDLRNSKKLVKILNFKEFPNLEWLNLEGCENLVELDPSIGLLRKLVYLKLDFCYNLLSIPNNIFNLSSLEDLHMSGCSKVFNNSRHLKKSDISESATQYRSTSPVLNLIMLPHDSSFSAPTTHTYLLPSLHSLYCLRNVDISFCGLSQVPDAIECLKWLERLNLGGNNFVKLPSLRKLSKLVYLNLEHCRLLESLPQLPSPATIGREYRENKDCWITGLVIFNCPKLVERERCNSMTFSWMTQFIKANPQSHPAYFDKIHIVTPGSEIPSWINNRSMGGSIPIDESPVMHDNNNNIIGFVSCVVFSMAPQDQTMIGCFPLLVYLKMGSKRNRSRLPLIIDRDLITTKSSHLWLIYFPRESYDVFGTIHVQCIMGDIVGLEVKSCGYRWVCKQDLQDFNLTMMNHENSLAQKGKILEIEHETQPQRQPKSFISSNKD* 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2677 1063 SMART till_3 19 159 IPR000157 GO:0007165
Mal1g2677 1063 Gene3D Ribonuclease Inhibitor 491 729 IPR032675 -
Mal1g2677 1063 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 162 IPR035897 -
Mal1g2677 1063 Pfam TIR domain 20 181 IPR000157 GO:0007165
Mal1g2677 1063 Pfam C-JID domain 891 1021 IPR045344 -
Mal1g2677 1063 Gene3D Ribonuclease Inhibitor 741 831 IPR032675 -
Mal1g2677 1063 SUPERFAMILY L domain-like 551 824 - -
Mal1g2677 1063 ProSiteProfiles TIR domain profile. 18 184 IPR000157 GO:0007165
Mal1g2677 1063 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 957 IPR044974 GO:0006952
Mal1g2677 1063 Gene3D - 354 439 IPR042197 -
Mal1g2677 1063 PRINTS Disease resistance protein signature 620 636 - -
Mal1g2677 1063 PRINTS Disease resistance protein signature 390 404 - -
Mal1g2677 1063 PRINTS Disease resistance protein signature 296 310 - -
Mal1g2677 1063 PRINTS Disease resistance protein signature 219 234 - -
Mal1g2677 1063 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 20 957 - -
Mal1g2677 1063 Gene3D - 1 157 IPR035897 -
Mal1g2677 1063 Gene3D - 168 349 IPR027417 -
Mal1g2677 1063 Pfam NB-ARC domain 200 425 IPR002182 GO:0043531
Mal1g2677 1063 ProSiteProfiles Leucine-rich repeat profile. 785 806 IPR001611 GO:0005515
Mal1g2677 1063 SUPERFAMILY "Winged helix" DNA-binding domain 426 524 IPR036390 -
Mal1g2677 1063 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 449 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2677 Mal-Chr1 37473084 37476805 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2677 20 812 WRKY Transcription Factor Family AT4G12020 28.830 1.75e-70 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2677 - - mtr:MTR_6g488300 1528.46