Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2671 ATGGCTAGCAGCAGCAACTCATCTTCTTTAGCTCTTGTGACATCTCCTAGAAGAAATTATTATGATGTGTTTGTCACCTTCAGAGGTGAAGACACTCGCAACAATTTCACTGATTATCTTTTTGATGCCCTTGAAACTACAGGCATTTTTGCATTCCGGGATGACACTAATCTTCAAAAAGGTGAATCCATAGGACCTGAGCTACTTCGAGCAATTGAAAGATCTCAGGTTTTTGTTGCGATCTTCTCAAGGAACTATGCATCCTCAACATGGTGCTTGCAAGAACTAGAAAAGATATGTGAATGTGTTTTGGTATCTGGAAAACATGTTCTTCCTGTTTTCTATGATGTTGATCCTTCTGAGGTGCGAAAGCAAAGTGGGATTTATGGTGAAGCCTTTACTAAACACGAGCAAAGATTCCAACAAAACTCCCAGACGGTGTCAAGATGGAGGGAAGCTCTAAAACATGTGGGGAGTATCTCTGGTTGGGATCTACGTGATAAGCCACAATCTGCAGAGATTAAAAAGATTGTTCAAAAGATAATGAATATATTAGAGTGCAAATCTTCATGTGTTTCAAAAGATTTAGTTGGGGTGATTTCTCCTATAGAAGCATTACAAAATCATTTACTTTTGGACTCGGTTGATGGTGTTCGTGCTATAGGAATTTGTGGGATGGGAGGAATAGGGAAAACAACCCTTGCTAAGGCTTTATATGGTCAAATCTCTCATGGATTTGGTGCATCCTGTTTCATTGATGATGTAAGCAAAATTTATAGATTACATGATGGTCCACTCGGTGCACAAAAGCAAATCCTACTTCAAACTCTCGGCATAGAACACAATCAAGTAAGCAATCATTACAACGCAACTAATTTGATACGAAGTAGGCTATGTCGTGAAAGAGTCCTTCTGATTCTAGATAATGTTAATCAAGTTGAACAACTGGAAAAAATAGCTGTGCATCGTGAATTGCTAGGTGTGGGGAGTAGAATCATTATCATTTCTAGAGATGAGCATATATTAAAAGAGTATGGAGTGGATGTAGTTTACAAAGTTCCACTTTTGAATCGGACCGAATCTCGAAAGTTATTTTGTCAAAAAGCTTTCAAACTTGAGAAAATGATTATGAGTAACTATCAAAATTTGGCATATGAGATACTGAATTATGCTAATGGTCTGCCACTAGCCATTACAATATTGGGCTCATTTTTGTTTGGTCGTAGTGTGACTGAATGGAAGAGTGCATTGACTAGATTGAGAGAAAGTCCAGATAAAGATATCATGAATGTGTTGCAATTAAGTTTTGATGGGCTAGAGGAGACGGAAAAAGAAATATTTCTTCATATTGCTTGTTTTTTCAATTCCCATTTGGAGAAATATGTTAAAAATGTTCTAAACTGTTGTGGGCTTCATGCTGATATTGGATTAAGAGTTCTCATTGATAAATCACTTATAAGCATTAAGGATACAAAGATTGAAATGCATTCTTTGTTGGAAGATCTAGGCATAAAAATTGTCGAAGAAAATTCAAGCAAAGAGCCAAGAAAGTGGAGCAGGTTGTGGTCGATAGAACAACTCTACGATGTTATGTTGGAGAATATGGAAAAGCATGTTGAAGCCGTAGTTTTGAATGATGAAGATTGTGAAGATGATGAAGATGATGAGGACATGGATATGAGAGTTGAACACTTGTCAAAAATGAGTAATCTTAGATTGCTCATCGTCAAGTATAGTGGGAATATCTCTGGAAGCCCAAAGTATCTTCCAAACAAATTAAGATATGTTGAGTGGTATGAATATCCTTCGATGTATTTGCCATCAAGTTTTCAGCCCAATCAACTTGTTGAATTGATCTTGAAGAGTAGCAACATCAAACAACTGTGGAAAAACAAGAAGTATCTGCCCAATTTGAAAACTTTGGATCTAAGAAACTCCAAAAAACTAGTAAAGATACTAGATTTTGGAGAGTTCCCGAATCTTGAGTGGCTTAATCTGAAAGGATGTGTAAAACTTGTGCAGTTGGATCCATCTATTGGACTTCTAAAAAAGCTTGTTTACTTGAATGTAAAAGATTGCAAAAAACTAGAAAGCATACCCAACAACATATTTGGTCTTAGCTCTCTTAAAGATCTAAATATGCATGGTTGTTCCAAAGTGTTTAACAATCCAAGTCATTTGAAGAATCCGGATATATCCTCAAAAAAGAAGAAGCATGATATAAGTGAAAGTGCATCACATTCCCAATCAACTCCCTCCATCTGCAAAAGGACCATATTGCCTCACCATTCATCGTTTTCAACTCCCGCAACAAACACAAATTTGTTTCCAAATTCATTGCATAACTTATATTGTTTGCGTAAAGTTGATATTAGCTTTTGCCGTCTAAGACAAGTCCCTGATGCCATTCAACATTTAGGTTGTCTAGAAATATTATATTTAGGGGGAAACAACTTTGTGACTCTACCTAGCCTGAAGGATCTTTCCAAACTTGTATACTTAAATTTGGAGCATTGCAGGTTGTTGGAATCTTTGCCTCAACTTCCTTTTCCTACTGCTATCGAGTGGGATCATCATAAGAACAAAAATTGGTGTAGAATAGGATTGGTCATTTTCAATTGTCCAAAATTAGGTGAGAGGGAACGTTGCAGTAGCATGATAGTTTCATGGATGATAAAATTCATTCAGGCAAACCCACAATCTTACCCTACCTACTTTAATGGGATTCAAATTGTTACTCCAGGAAGTGAAATACCAAGTTGGATCAGCAATCAGAGAGTGGGTGGTGCCATTCTAATAAACCCACCTCCTACTATGCATGACAATAACAATATCATTGGCCTTGTGTGCTGTGTAGAATTTTCAATGGCACCTCATGATCCAACAACGATAAGAAGTTCTCCATCGAGGGCTCATATGACACTGCAAATTGATGATAGTAATGGCCGTCGGAGGAGCCTTACCATTCTTCCAGTAATTCTCGATAGAGATCTTATTACGACCGAATCAAATCACCTATGGCTAATCTACTTCCCCCAAGAGTTATCCTATGATATTTTGTGTGAGTTTATGCGTGTCTACATTATTAGGGGTGAAGGTTTTGGTATGAAAGTGAAGAATTGTGGGTACCATTGGGTATGTAAACAAGACCTAGAAGTGTTCGACTTAGCACTGATGTATCTTGAAAATTCCTTATCTAGGAAGCGCAAGATTTTGGAAATTGAAGATGAGACACAACCGCAACCACAACCACAGCCAAAATCATTCATCTCATAA 3276 0.373 MASSSNSSSLALVTSPRRNYYDVFVTFRGEDTRNNFTDYLFDALETTGIFAFRDDTNLQKGESIGPELLRAIERSQVFVAIFSRNYASSTWCLQELEKICECVLVSGKHVLPVFYDVDPSEVRKQSGIYGEAFTKHEQRFQQNSQTVSRWREALKHVGSISGWDLRDKPQSAEIKKIVQKIMNILECKSSCVSKDLVGVISPIEALQNHLLLDSVDGVRAIGICGMGGIGKTTLAKALYGQISHGFGASCFIDDVSKIYRLHDGPLGAQKQILLQTLGIEHNQVSNHYNATNLIRSRLCRERVLLILDNVNQVEQLEKIAVHRELLGVGSRIIIISRDEHILKEYGVDVVYKVPLLNRTESRKLFCQKAFKLEKMIMSNYQNLAYEILNYANGLPLAITILGSFLFGRSVTEWKSALTRLRESPDKDIMNVLQLSFDGLEETEKEIFLHIACFFNSHLEKYVKNVLNCCGLHADIGLRVLIDKSLISIKDTKIEMHSLLEDLGIKIVEENSSKEPRKWSRLWSIEQLYDVMLENMEKHVEAVVLNDEDCEDDEDDEDMDMRVEHLSKMSNLRLLIVKYSGNISGSPKYLPNKLRYVEWYEYPSMYLPSSFQPNQLVELILKSSNIKQLWKNKKYLPNLKTLDLRNSKKLVKILDFGEFPNLEWLNLKGCVKLVQLDPSIGLLKKLVYLNVKDCKKLESIPNNIFGLSSLKDLNMHGCSKVFNNPSHLKNPDISSKKKKHDISESASHSQSTPSICKRTILPHHSSFSTPATNTNLFPNSLHNLYCLRKVDISFCRLRQVPDAIQHLGCLEILYLGGNNFVTLPSLKDLSKLVYLNLEHCRLLESLPQLPFPTAIEWDHHKNKNWCRIGLVIFNCPKLGERERCSSMIVSWMIKFIQANPQSYPTYFNGIQIVTPGSEIPSWISNQRVGGAILINPPPTMHDNNNIIGLVCCVEFSMAPHDPTTIRSSPSRAHMTLQIDDSNGRRRSLTILPVILDRDLITTESNHLWLIYFPQELSYDILCEFMRVYIIRGEGFGMKVKNCGYHWVCKQDLEVFDLALMYLENSLSRKRKILEIEDETQPQPQPQPKSFIS* 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2671 1091 SUPERFAMILY "Winged helix" DNA-binding domain 427 530 IPR036390 -
Mal1g2671 1091 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 647 847 - -
Mal1g2671 1091 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 22 638 - -
Mal1g2671 1091 Pfam C-JID domain 914 1052 IPR045344 -
Mal1g2671 1091 ProSiteProfiles TIR domain profile. 19 185 IPR000157 GO:0007165
Mal1g2671 1091 Gene3D Ribonuclease Inhibitor 559 740 IPR032675 -
Mal1g2671 1091 SMART till_3 20 160 IPR000157 GO:0007165
Mal1g2671 1091 SUPERFAMILY L domain-like 565 856 - -
Mal1g2671 1091 MobiDBLite consensus disorder prediction 728 753 - -
Mal1g2671 1091 PRINTS Disease resistance protein signature 633 649 - -
Mal1g2671 1091 PRINTS Disease resistance protein signature 391 405 - -
Mal1g2671 1091 PRINTS Disease resistance protein signature 220 235 - -
Mal1g2671 1091 PRINTS Disease resistance protein signature 297 311 - -
Mal1g2671 1091 MobiDBLite consensus disorder prediction 730 744 - -
Mal1g2671 1091 Pfam TIR domain 21 185 IPR000157 GO:0007165
Mal1g2671 1091 Gene3D Ribonuclease Inhibitor 762 856 IPR032675 -
Mal1g2671 1091 ProSiteProfiles Leucine-rich repeat profile. 808 829 IPR001611 GO:0005515
Mal1g2671 1091 Gene3D - 187 350 IPR027417 -
Mal1g2671 1091 Gene3D - 355 440 IPR042197 -
Mal1g2671 1091 Pfam NB-ARC domain 203 426 IPR002182 GO:0043531
Mal1g2671 1091 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 163 IPR035897 -
Mal1g2671 1091 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 450 IPR027417 -
Mal1g2671 1091 Gene3D - 13 186 IPR035897 -
Mal1g2671 1091 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 638 IPR044974 GO:0006952
Mal1g2671 1091 SMART AAA_5 217 356 IPR003593 -
Mal1g2671 1091 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 647 847 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2671 Mal-Chr1 37372478 37378027 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2671 21 835 WRKY Transcription Factor Family AT4G12020 30.523 2.32e-83 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2671 - - mtr:MTR_6g488300 1457.2