Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2665 ATGAAGAATCAAAATAGCTTAATTCTACCTTTTCTTCTTCTCATTCTCATTCTCATTCTCAATTTAGCTACAACAAAAGCTGCTTTTGGTGTTGGTGTAGGTGTAGGTGTTGGAGGTGGAGTAGTTTGGGTAGGGGGTGGGAATAGCAACCAAAATCCAAAATCCTATGAATCTCCAACATCAAAAATGGATTTAGCTTATACAGCACTTCAAGCATGGAAATCTTCAATCACTGATGACCCTTTAAAGATTCTAGATTCTTGGATTGGTTCAAATGTATGTTCATACAAAGGAATCTTCTGTGCAAATCCTGAAAATGGAATGACTTCAACATCACCTTCTACTTCACTAGTTCTTGCAGGAATAGATCTCAACCATGCAAATCTTCAAGGAACACTTGTACAAGAATTATCATTACTCACTGATATGTCACTACTTCATCTCAACAGTAACAGATTCAGTGGAACAGTTCCTGAAACATTCAAAGATCTTGTTTCACTTCAAGAATTAGACTTAAGCAATAATCAACTTTCAGGTTCTTTTCCTTTGGTTACTTTGTATATGCCAAGTTTAATATATTTGGATATTAGATTCAACTTTTTCTCAGGTTCATTACCTCAAGAGCTTTTCAACAAGAATCTTGATGCAATATTTCTCAACAACAATTATTTTGAAGGTGAAATACCTCAGAATTTAGGTAATTCACCTGCTTCTGTGATAAACTTAGCTAATAATAAATTGAGTGGAAATATTCCAGCAAGTTTTGGTTTCATGGGATCAAAGATCAAAGAGATTTTGTTTCTGAATAATCAATTAACTGGTTGTATACCAGAAGGAGTTGGACTTTTTACTGAAATGGAAGTTCTTGATGTGAGTTTCAATTCATTGATGGGTCATTTACCTGATACATTATCATGTTTACAGAATATTGAAGTGCTTAATTTGGCTCATAATCAGCTTTCTGGAGAGTTATCAGATATAATTTGTTCTTTGAGGAGTTTGGCTAATTTAACTGTTGCTTATAATTTCTTTTCTGGGTTTAGTCAACAATGTTCAAAGCTGAATTTTAGGAATGTTGGTTTTGATTTTTCACTTAATTGTATTCCTGGGAGGAACATGCAAAGACCACAACCTGAATGTTCTATGATCCCAGGTGGTAGCTTAAGTTGTCTAAGAATTCCAACACCAAAGCCTCTTGTTTGTGGTTCTTTGTCGGTAAGTACCTCTGAGAACACTCGTTTCGCTTCACAATCACATACCCAATTTTCTAAATCACAATCTCCTCCTTGA 1290 0.3473 MKNQNSLILPFLLLILILILNLATTKAAFGVGVGVGVGGGVVWVGGGNSNQNPKSYESPTSKMDLAYTALQAWKSSITDDPLKILDSWIGSNVCSYKGIFCANPENGMTSTSPSTSLVLAGIDLNHANLQGTLVQELSLLTDMSLLHLNSNRFSGTVPETFKDLVSLQELDLSNNQLSGSFPLVTLYMPSLIYLDIRFNFFSGSLPQELFNKNLDAIFLNNNYFEGEIPQNLGNSPASVINLANNKLSGNIPASFGFMGSKIKEILFLNNQLTGCIPEGVGLFTEMEVLDVSFNSLMGHLPDTLSCLQNIEVLNLAHNQLSGELSDIICSLRSLANLTVAYNFFSGFSQQCSKLNFRNVGFDFSLNCIPGRNMQRPQPECSMIPGGSLSCLRIPTPKPLVCGSLSVSTSENTRFASQSHTQFSKSQSPP* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2665 429 SUPERFAMILY L domain-like 69 354 - -
Mal1g2665 429 Gene3D Ribonuclease Inhibitor 66 235 IPR032675 -
Mal1g2665 429 Gene3D Ribonuclease Inhibitor 236 360 IPR032675 -
Mal1g2665 429 Pfam Leucine rich repeat 145 199 IPR001611 GO:0005515
Mal1g2665 429 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 3 429 - -
Mal1g2665 429 ProSiteProfiles Leucine-rich repeat profile. 166 187 IPR001611 GO:0005515
Mal1g2665 429 Pfam Leucine rich repeat N-terminal domain 68 101 IPR013210 -
Mal1g2665 429 PRINTS Leucine-rich repeat signature 167 180 - -
Mal1g2665 429 PRINTS Leucine-rich repeat signature 307 320 - -
Mal1g2665 429 PANTHER LRR/EXTENSIN 3 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2665 Mal-Chr1 37223944 37225233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2665 56 392 Leucine-rich Repeat extension Gene Families AT3G24480 48.837 3.11e-104 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2665 - - gmx:100790827 603.979