Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2639 ATGCATTACATTTTCAGCATGTTGTTATTTCTTCTACTTCTTGTAGAAAATCTCAACACAATACATTGTCATACAAAGGGAATTCGACCGATACGTTCTTCAGGAAACGGTTTATCAACCATTAACACAACAAGAACAGAGTTATCAGAACAACAATTCATGAAATGGGTGAGTTTTGTTGGTAATCTTAAACACTCAGTTTTCAAGGCTGCAAAAAATAAGCTCTTTGCTTCTTATACTTTGCACGTTGATAAGAATCCTTCTTTTGGAGATTTTGCCACAATTCAAGAAGCCATTGATTCTCTTCCTTCTATCAATCTTGTTAGAGTTGTCATCAAGGTTCATGCAGGGGTTTACACGGAGAAAGTTAACATTCCTCCTTTAAAATCATTCATAACCATAGAAGGAGATGGTGCAGATACAACAATTGTTCAATGGGGTGACACTGCGGCTACACCTGGTCCAAGAGGGAATCCAATGGGAACATATGGTTCAGCAACTTTTGCAGTTAATTCACCTTATTTCATTGCTAAGAACATCACATTCCAAAACACTTTTCCTCTTCCTGCACCTGGAGCAATTGGAAAACAAGCAGTAGCATTTAGAATTTCAGCAGACACAGCATCATTCTTAGGGTGCAAATTTTTAGGAGCACAAGATACACTTTATGATCATATTGGTAGACATTACTATAAAGATTGTTACATTGAAGGTTCTGTTGATTTCATATTTGGCAATGCACTCTCCTTATTTGAGGGATGTCACGTGCATGCCATAGCAAGAAATACAGGAGCACTAACAGCACAAGGAAGGAGCAGTATATTACAAGACACAGGTTTTTCATTTGTGAATTGTAAGGTCACGGGTTCAGGCGCACTATACCTTGGAAGAGCTTGGGGTCCTTTTTCAAGAGTTGTCTTTGCTTATACATATATGGACAATATCATCATTCCTAAAGGATGGTATAATTGGGGTGATCCTAACCGTGAAATGACTGTGTTCTATGGACAATACAAATGCACAGGAGCTGGAGCAAGTTTTGCTGGGAGAGTATCATGGTCAAGAGAACTCACTGATGAAGAAGCTAGACCTTTTCTTTCACTTACCTTTATTGATGGGACTGAATGGATAAATTTTTAG 1140 0.3816 MHYIFSMLLFLLLLVENLNTIHCHTKGIRPIRSSGNGLSTINTTRTELSEQQFMKWVSFVGNLKHSVFKAAKNKLFASYTLHVDKNPSFGDFATIQEAIDSLPSINLVRVVIKVHAGVYTEKVNIPPLKSFITIEGDGADTTIVQWGDTAATPGPRGNPMGTYGSATFAVNSPYFIAKNITFQNTFPLPAPGAIGKQAVAFRISADTASFLGCKFLGAQDTLYDHIGRHYYKDCYIEGSVDFIFGNALSLFEGCHVHAIARNTGALTAQGRSSILQDTGFSFVNCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGAGASFAGRVSWSRELTDEEARPFLSLTFIDGTEWINF* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2639 379 Gene3D - 76 379 IPR012334 -
Mal1g2639 379 PANTHER PECTINESTERASE 5 378 - -
Mal1g2639 379 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 378 - -
Mal1g2639 379 SUPERFAMILY Pectin lyase-like 77 378 IPR011050 -
Mal1g2639 379 Pfam Pectinesterase 90 373 IPR000070 GO:0030599|GO:0042545
Mal1g2639 379 ProSitePatterns Pectinesterase signature 2. 236 245 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2639 Mal-Chr1 36903446 36909111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2639 1 377 Carbohydrate Esterase AT5G47500 41.270 1.68e-100 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2639 K01051 - gmx:100793314 665.225