Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2627 ATGAGTTCTAAGAAAGGTGAGGTGAGAAAATTAAAAGAGGGAGGTTCAATAGGCATAATTGTGAGATATGGTGATTGGATTGATGTAGTTCTAATGTTAATGGGTGCTTTGGGAGCAATAGGAGATGGAATGTCAACAAATATTTTGCTTCTCTATGCTAGCCGTATCATGAATAGCTTAGGTGGCAGTAATAATAATAACAGTGAGACTTCTATGTCTGAGGTTGAAAAGTGCAGCTTATATTTTGTCTACTTGGGATTGGCAGCTATGGTGATGGCTTTCATGGAAGGCTATTGTTGGAGCAAAACAAGTGAGAGGCAAGTGTTGAGAATTCGTTACAAGTATTTGGAAGCTGTCCTTAGACAAGAAGTTGGGTTTTTTGATTCAGAAGAAACAAATACTTCTGAAATCATTAATAGCATATCAAAAGACACTTCTCTTATACAAGAGGTTTTAAGTGAAAAGGTGCCTTTATTTTTGATGCAATCATCATCATTCATATCAGGGATTATCTTTGCAACATATTTTTCATGGAGGTTGGCATTAGTAGCATTTCCAACTCTTCTTTTACTAATAATCCCTGGCATGATATATGGAAAATATCTCATCTATTTATCGAAATCATCAATGAAAGAATATGGAAAAGCAAATGCAATTGTTCAACAAGCACTAAGCTCAATAAAAACAGTGTATTCATTCACAGCTGAGAAGAGAATAATGGAGAAATATTCAGATATATTAGATAGAACTTCAAAGCTTGGAATTAAACAAGGTGTAGCTAAAGGTCTTGCTGTTGGAAGCACAGGTTTATCTTTTGCAATTTGGGCTTTTCTTGCTTGGTATGGAAGTCATTTGGTTATGTATAAAGGTGAAAGTGGTGGAAGAATTTATGCTGCTGGAATTTCCTTCATAATGAGTGGATTATCATTGGGAGTGGTACTTCCAGATTTGAAGTACTTCACAGAAGTATCAATTGCTGCATCAAGAATATTTGCTATGATTGATAGAACACCAGAAATTGATAGTGAAGACACAACAAAAGGAATTATATTAGAAACCATAAGTGGCAAATTAGATTTTGAGCATGTAAAATTCACATACCCTTCACGTCAAGAAAGTGTTGTACTTAGTGATTTTAATCTTAAAATTGAAGCTGGAAAAACTGTTGCATTAGTTGGTGCAAGTGGAAGTGGTAAATCAACAGCAATAGCATTAGTACAAAGATTTTATGATGCAAATGAAGGTGTTGTTAAGGTTGATGGTTTTGATATAAAGAGTTTGCAATTGAAATGGATAAGAGGAAAAATGGGACTTGTGAGTCAAGAACATGCTATGTTTGGGGCATCTATTAAGGAAAATATTATGTTTGGGAAAAATGATGCTACTATGGATGAAATTGTTGCTGCTGCTAATGCTTCTAATGCTCATAATTTCATTAGGCAGCTTCCTGAAGGTTATGAAACTAAGATTGGAGAAAGAGGTGCACTTCTTTCAGGAGGACAAAAGCAAAGAATAGCCATTGCAAGAGCTATCATAAAAAATCCTGTTATTCTCCTACTTGATGAAGCAACTAGTGCACTTGACTCTGAATCTGAATTACTGGTCCAAAATGCCCTTGATCAAGCCTCTATGGGGAGGACTACTTTGGTTGTTGCTCACAAGCTATCAACAATTAGAAATGCAGACCTAATAGCAGTTGTAAGTAATGGTTGCATCATTGAAAGTGGCACACACAATGAACTCATCAACACTCCAAATGGCCACTATGCAAAATTAGCAAAATTACAAACACAATTAAGCATTAATGATGACCAAGATCAAAATCAAGAACAACAAAGCATTCTTCTTTCTGCAGCAAGAAGTAGTGCAGGTAGAACAAGCACTGCAAGATCAAGCCCTTTAATCTTTCCAAAATCACCATTACCTAATGATATAATCACTTCTCAAATATCTCATCCATCACCTTCATTTTCAAGGCTTCTTTTCTTGAATTCTCCTGAATGGAAACACGGACTAATTGGAACATTTTCAGCTATAGCAAATGGTTCAATTCAACCTTTATATGCATTAACAATCGGTGGCATGATTTCGGCTTTTTTTGCTAAAAGTCATCAAGAAATGAAACACAGAATCATGAACTATTCATTGATTTTCACCGCTCTGTCGCTTGCTTCTATTACACTCAATCTCTTGCAACACTACAATTTTGCTTTTATGGGAGCAAAGTTAACAAAAAGGATAAGATTGTGTATGTTGGAAAAGATCTTAACCTTTGAAACTGCTTGGTTTGATGAGGAAAAAAACTCTAGTGGAGCATTATGTTCAAGGTTGAGTAACGAAGCTTCGATGGTGAAATCGCTCGTTGCAGATAGAGTCTGTTTACTTGTTCAAACAGCTTCAGCCGTCACAATCGCGATGATCATAGGACTTGCTGTAGCTTGGAAGCTAGCTCTTGTTATGATAGCAGTTCAACCGCTTACAATACTTTGTTTTTACACGCGAAAAGTTTTGCTTTCTACGCTTTCAATGAAATTCGTTAAGGCGCAGAACCAAAGCACGCAGATTGCGGTTGAGGCGGTTTATAATCACAGAATTGTAACTTCATTTGGAAGTATCACAAAAGTTTTGAGACTTTTCGATGAGGCGCAAGAGGCACCGAGGATGGAAGCTAGGAAGAAAGCTTGGCTAGCTGGCATTGGTATGGGATCTGCTCAGTGTTTAACATTTATGTGTTGGGCTTTGGATTTTTGGTATGGTGGTAAATTGGTAGAAAAGAGAGAAATTTCTTCAGGTGATGTGTTCAAAACATTTTTTGTGTTGGTGAGTACTGGAAAAGTTATAGCTGAAGCTGGTAGCATGACTTCTGATCTTGCTAAAAGCTCAACAGCAGTTGCATCTGTCTTTGAAATTCTTGATAGACAATCACTTATTCCCAAGGCTGAAGAAGGAACTGATGGAATTAAGTTGGAAAAGCTAAGTGGAAAAATAGAGTTAAAGAATGTTGATTTTTCTTATCCAAGCAGAGCAAAGACACCAATTTTGCGCAAGTTTTGCTTAGAAGTAAGGCCAGGAAAAAGTATTGGACTAGTTGGAAAAAGTGGATGTGGAAAATCAACAGTTATTGCATTAATACAAAGATTCTATGATGTTGAAAGAGGATCAGTGAAAGTTGATAATGTGGATTTAAGAGAATTAGATATTCATTGGTATAGACAACACACTGCACTAGTAAGTCAAGAACCTGTGATATATTCTGGTAGCATACGTGACAACATTTTGTTTGGAAAACAAGATGCAAATGAAAATGAAGTTGTTGAGGCTGCTAGATCTGCAAATGCTCATGATTTTATATCGTCATTAAAAGATGGATATGAAACTGAATGTGGAGAAAGGGGGGTGCAATTATCAGGAGGACAAAAGCAAAGAATAGCAATTGCAAGGGCCATAATTAGAAATCCAATCATACTTCTACTAGATGAAGCAACAAGTGCTTTGGATGTACAATCAGAACAAGTTGTGCAAGAAGCACTTGATAGGATTATGGTAGGAAGAACTACAATTGTTGTGGCACATAGGCTTAACACAATCAAAGAACTTGACTCAATTGCTTATGTGTTAGAGGGTAAGATTGTGGAACAAGGAAGCTATTCTCAGCTTAAGCACAAGAGAGGTGCTTTTTTCAACCTTGCCAATCATCAAATTCAAACTTAG 3711 0.3643 MSSKKGEVRKLKEGGSIGIIVRYGDWIDVVLMLMGALGAIGDGMSTNILLLYASRIMNSLGGSNNNNSETSMSEVEKCSLYFVYLGLAAMVMAFMEGYCWSKTSERQVLRIRYKYLEAVLRQEVGFFDSEETNTSEIINSISKDTSLIQEVLSEKVPLFLMQSSSFISGIIFATYFSWRLALVAFPTLLLLIIPGMIYGKYLIYLSKSSMKEYGKANAIVQQALSSIKTVYSFTAEKRIMEKYSDILDRTSKLGIKQGVAKGLAVGSTGLSFAIWAFLAWYGSHLVMYKGESGGRIYAAGISFIMSGLSLGVVLPDLKYFTEVSIAASRIFAMIDRTPEIDSEDTTKGIILETISGKLDFEHVKFTYPSRQESVVLSDFNLKIEAGKTVALVGASGSGKSTAIALVQRFYDANEGVVKVDGFDIKSLQLKWIRGKMGLVSQEHAMFGASIKENIMFGKNDATMDEIVAAANASNAHNFIRQLPEGYETKIGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESELLVQNALDQASMGRTTLVVAHKLSTIRNADLIAVVSNGCIIESGTHNELINTPNGHYAKLAKLQTQLSINDDQDQNQEQQSILLSAARSSAGRTSTARSSPLIFPKSPLPNDIITSQISHPSPSFSRLLFLNSPEWKHGLIGTFSAIANGSIQPLYALTIGGMISAFFAKSHQEMKHRIMNYSLIFTALSLASITLNLLQHYNFAFMGAKLTKRIRLCMLEKILTFETAWFDEEKNSSGALCSRLSNEASMVKSLVADRVCLLVQTASAVTIAMIIGLAVAWKLALVMIAVQPLTILCFYTRKVLLSTLSMKFVKAQNQSTQIAVEAVYNHRIVTSFGSITKVLRLFDEAQEAPRMEARKKAWLAGIGMGSAQCLTFMCWALDFWYGGKLVEKREISSGDVFKTFFVLVSTGKVIAEAGSMTSDLAKSSTAVASVFEILDRQSLIPKAEEGTDGIKLEKLSGKIELKNVDFSYPSRAKTPILRKFCLEVRPGKSIGLVGKSGCGKSTVIALIQRFYDVERGSVKVDNVDLRELDIHWYRQHTALVSQEPVIYSGSIRDNILFGKQDANENEVVEAARSANAHDFISSLKDGYETECGERGVQLSGGQKQRIAIARAIIRNPIILLLDEATSALDVQSEQVVQEALDRIMVGRTTIVVAHRLNTIKELDSIAYVLEGKIVEQGSYSQLKHKRGAFFNLANHQIQT* 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2627 1236 CDD ABC_MTABC3_MDL1_MDL2 359 596 - -
Mal1g2627 1236 Pfam ABC transporter 376 525 IPR003439 GO:0005524
Mal1g2627 1236 Gene3D - 348 597 IPR027417 -
Mal1g2627 1236 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 672 959 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g2627 1236 CDD ABC_6TM_Pgp_ABCB1_D1_like 32 330 - -
Mal1g2627 1236 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 358 594 IPR003439 GO:0005524
Mal1g2627 1236 Gene3D ABC transporter type 1, transmembrane domain 21 899 IPR036640 GO:0005524|GO:0016021
Mal1g2627 1236 Gene3D - 986 1236 IPR027417 -
Mal1g2627 1236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 986 1233 IPR027417 -
Mal1g2627 1236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 349 596 IPR027417 -
Mal1g2627 1236 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 33 322 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g2627 1236 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 21 1233 IPR039421 -
Mal1g2627 1236 PANTHER ABC TRANSPORTER B FAMILY MEMBER 8-RELATED 21 1233 - -
Mal1g2627 1236 ProSitePatterns ABC transporters family signature. 1135 1149 IPR017871 GO:0005524
Mal1g2627 1236 ProSitePatterns ABC transporters family signature. 497 511 IPR017871 GO:0005524
Mal1g2627 1236 Pfam ABC transporter transmembrane region 672 942 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g2627 1236 Pfam ABC transporter transmembrane region 34 295 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g2627 1236 SMART AAA_5 385 571 IPR003593 -
Mal1g2627 1236 SMART AAA_5 1023 1215 IPR003593 -
Mal1g2627 1236 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 996 1232 IPR003439 GO:0005524
Mal1g2627 1236 SUPERFAMILY ABC transporter transmembrane region 28 341 IPR036640 GO:0005524|GO:0016021
Mal1g2627 1236 SUPERFAMILY ABC transporter transmembrane region 659 973 IPR036640 GO:0005524|GO:0016021
Mal1g2627 1236 CDD ABC_6TM_Pgp_ABCB1_D2_like 661 977 - -
Mal1g2627 1236 Pfam ABC transporter 1017 1163 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2627 Mal-Chr1 36740109 36751081 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2627 4 1226 Calmodulin-binding Proteins AT2G36910 42.243 0.0 952