Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2588 ATGTCAACAACTTCTCTTACCATCATCTTCTTCTTCGTTTCCCTTCACTTGCTGCTTTACTCTTCTTCCTCAGCTAAGTTGGTTTCTACGAGTGTCTCATTTGCTTCATCTGAACCAGCTAAAGGGTGGTCAGTTAAACCTTCTTCTGGGCCATCTTCTGCTCCTGCGTTTTCTTCATCTTTTCAAGGTTCTAGTGTGACTCCAGGACCAAAACATCCTCATCGTCGCAGTCAATACCATCGCGTGAAACCTTATGCTGTGTCTCCTTCCCCTTCGGAGGGCCAAGAATGTGGCCTAAGCTGCAGGGATCCACTCACAACAACTCCCTTTGGTTCTCCTTGTGGCTGTGTATTTCCCATGAAAGTCGGACTTTTACTGGATGTAGCTCCTTTGGTTGTTTTTCCTGTAATTCGTGAGTTAGAGATTGAACTTGCATCTGGAACACATTTGAAGCAAAGCCAAGTGAGGATAATGGGTGTAAGTGCTGACATTCAAAATCAAGAAAGAACCATAGTTGATATTAACCTGATTCCGCTTGGTGAAAAATTTCGCAATACAACTGTGCTTCTGATATCCCGAAGATTTTGGCACAAAAAAGTTCTTCTAAATAGGAGTCTTTTTGGTGGTTACACAGTTTTGTACACTACTTATCCAGTATCAGGGATGCCATCATCGCCACCACATGGAACAATAACTGGGATTGGTCCTCTTCCCAGTGGAAGTGCTGCAGGTCTTCTCCCATTCCCTGCCAGCTTTATCAACAAGAACGAGGAAATGAATCCTAGAACCATAATCATCATTGCTGTATCTTCCATTATAATCTTTCTGGGTTTGGTTGGAATATTTTTCATTATTTGTAAGTGGAGGAAACTCAGGAAACCATCAAGTGCGGTTCGCCCGCCATTCACATTGTCTCTAAATAATAGATCTGCCATGGAGTCTATGTTGTCTAGCAGAATTACAAGCTCATCATCAGTGTCCCATATGTCCAACGTAGCTACTTCTGCTCTTTCTGTGAAAACATTTTCCCTTTCTGAGCTTCAGAAAGCAACAAATAAGTTCAGTTCACAAAGATTATTGGGAGAAGGAGGATTTGGGCATGTTTATCATGGGAGATTGGATGATGGAACTGATGTTGCGGTTAAGCTACTAACAAGGGATATTCATCAAAGTGGAGACCGTGAATTTTATGTGGAAGTTCAGATGCTGTGCCGTTTTCATCATCGTAATCTTGTGAAACTCATCGGTATATGCACAGAAGGGCACAAACGATGCTTGGTGTATGAGCTTATCCGCAATGGAAGTGTCGAGTCTCATTTGCATGGTGTTGACCAGATAAATCACCCTCTAGATTGGGAAGCACGGAAAAAGATTGCCCTTGGAGCTGCAAGAGGATTGGCCTATCTTCACGAGGATTCTAATCCTCGTGTAATCCACCGAGACTTTAAAGCTAGCAATGTGTTGTTAGAAGATGACTTTACCCCCAAGGTTTCTGATTTTGGATTAGCAAGAGAAGCAATTGAAGGAAGTCATTCTATTCCTACAAGGGTCATGGGGACTTTTGGGTATGTCGCCCCAGAATATGCAATGACAGGCCATTTGCTCGTTAAAAGTGATGTTTACAGTTATGGTGTTGTGCTGCTTGAACTTCTAACAGGAAGAAAGCCTGTGGACATGTCCCAACCTCTTGGAGAGGAGAATCTCGTAGTATGGGCACGACCACTTTTGAAAAGTAGAGAGGGTTTAGAACAGCTGGTGGATCCGACTTTGGCTGGAACTTATGACATTGATGAAATGGCAAAGGTTGCTGCTATTGCTTCAATGTGTGTTCACCTGGATGTCACTCAGAGACCCTTTATGGGTGAAGTTGTGCAGGCTCTTAAGTTTATATTCAATGACAACGATGAGACCGGTGTGGATTGCTTCAGTCCGAAGGAATCTTCTGGCCAAGAATCTGATTTTAGAGGCGATCTTTCTGATAGCAGTTGGTGGTATGATGAGCCTGATGATATAGCATGTCGACTAGCTTTTAGGCAAACATTAGCATCTTCCTTCATCACAATGGATTATAGTTCTGGTCCACTTGAACTGGAAAACAGACACTTTGTAGCTTCAGGCTTTGTGGGAGATGATATGTCTTTACCAAGTAGACTCGGGAATAGATCAGGTCCCTTGATGACCGCCCGAAGAAGCAACCTTTCCTTTTATAGGTTTAATGGAAGTCAGAGTGATCATGGAGTACTTCCTTCCAAGTGTGTTTGGAATGAGGGTTACTGGCCTTGA 2283 0.4306 MSTTSLTIIFFFVSLHLLLYSSSSAKLVSTSVSFASSEPAKGWSVKPSSGPSSAPAFSSSFQGSSVTPGPKHPHRRSQYHRVKPYAVSPSPSEGQECGLSCRDPLTTTPFGSPCGCVFPMKVGLLLDVAPLVVFPVIRELEIELASGTHLKQSQVRIMGVSADIQNQERTIVDINLIPLGEKFRNTTVLLISRRFWHKKVLLNRSLFGGYTVLYTTYPVSGMPSSPPHGTITGIGPLPSGSAAGLLPFPASFINKNEEMNPRTIIIIAVSSIIIFLGLVGIFFIICKWRKLRKPSSAVRPPFTLSLNNRSAMESMLSSRITSSSSVSHMSNVATSALSVKTFSLSELQKATNKFSSQRLLGEGGFGHVYHGRLDDGTDVAVKLLTRDIHQSGDREFYVEVQMLCRFHHRNLVKLIGICTEGHKRCLVYELIRNGSVESHLHGVDQINHPLDWEARKKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREAIEGSHSIPTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPLGEENLVVWARPLLKSREGLEQLVDPTLAGTYDIDEMAKVAAIASMCVHLDVTQRPFMGEVVQALKFIFNDNDETGVDCFSPKESSGQESDFRGDLSDSSWWYDEPDDIACRLAFRQTLASSFITMDYSSGPLELENRHFVASGFVGDDMSLPSRLGNRSGPLMTARRSNLSFYRFNGSQSDHGVLPSKCVWNEGYWP* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2588 760 Gene3D Transferase(Phosphotransferase) domain 1 431 644 - -
Mal1g2588 760 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Mal1g2588 760 PANTHER OS01G0750732 PROTEIN 12 756 - -
Mal1g2588 760 SUPERFAMILY Protein kinase-like (PK-like) 327 630 IPR011009 -
Mal1g2588 760 CDD STKc_IRAK 360 628 - -
Mal1g2588 760 Gene3D Phosphorylase Kinase; domain 1 324 430 - -
Mal1g2588 760 Pfam Protein tyrosine and serine/threonine kinase 357 627 IPR001245 GO:0004672|GO:0006468
Mal1g2588 760 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524
Mal1g2588 760 ProSiteProfiles Protein kinase domain profile. 354 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g2588 760 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 12 756 - -
Mal1g2588 760 MobiDBLite consensus disorder prediction 54 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2588 Mal-Chr1 35725231 35731894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2588 101 747 Receptor kinase-like Gene Family AT5G56890 51.278 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Mal1g2588 PK_Tyr_Ser-Thr 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2588 - - gmx:100815554 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2588 1 35725231 35731894 Mal1g2588 1 35725231 35731894 ECH