Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2574 ATGGCGCTATGGATGGAAAAGGGTTCGGAACCCTTAACCGAAAACGAGAAAGCTGACCTTGAAGCCATTGCTGCTATCAAAGAGTCTTCAGCTTTTGAACTCAAGGAAAAGGGTAACCAATATGTGAAGATGGGTAAGAAGCATTATTCTGATGCCATTGATTGCTACACAAGGGCAATTAATCAGAAAGCTTTGACTGATTCTGAGACTTCTATTCTTTTTTCAAATAGAGCCCATGTTAATTTGCTACTTGGAAATTTCAGAAGGGCTCTTACTGATGCTAATGATTCTATTAAGTTGTCCCCTTCAAATATAAAGGCAATTTATAGAGCTGCCAAAGCTTCTTTTTCATTGAATTTGTTGGATGAAGCACAAGACTATTGTCAGATGGGTCTTCATTTGGGCCCCAATAATGAGGAATTGAAGAAGCTTGACAAGCAGATTGAAATTAAGATATTGGAGAATGAAAAGCATGAGGCTGAAGTTTCTAAGGCTGTTGCAGAGGCAAAGGAACTTATTTCTGCAATGGAAAATAGAGGCTTGAAGATTGGAAAGGCTATGTATCGAGAACTTACTGGGTTAAAGAAACCTGTGCTAGACAAAAGTAACATCCTTCATTGGCCTGTTCTTCTTTTGTATGCTGAGGTTATGTCCAGTGACTTCATTGAAGATTTCTGCGAGACCGACATGTTTTCGGTTCACCTTGATATGATATCCTTTTATATGAAATATCAGCCGCTTCCATGGGATGTTGAAAATAATTACAAACGCGAATTTATCGAGTTATACTATGAGGCTGGTTCTGGACCTCGCCTATCTAAGGAAAAACTCCTTCGTTATCTATTAGAGGGAACTGCAGCAGCTTCTAGTGGGGAAGTTATTGGTGATGAAGAGAAAGATGCAGTTGAGGATCTTAAGCAAAACAAAAGCTCCCCTAAATGGATCAAAGTAAATGAAAGGAAAACACTCCATGATGTTCTGAAAGAGCCCAAATTCGTCATTCCTGAGATCCCAGTCTTCTATGTTGTTTCTAAGCAATCCAGCTTTTATAGCAAATTCAAAGATGGAAAGTGGGCTCCTCCAAGTGTAAAGAGAATCAATAATCAGTATGAACCTATTATTATCATGACTGTTTATGCTTCAAACTAA 1149 0.3856 MALWMEKGSEPLTENEKADLEAIAAIKESSAFELKEKGNQYVKMGKKHYSDAIDCYTRAINQKALTDSETSILFSNRAHVNLLLGNFRRALTDANDSIKLSPSNIKAIYRAAKASFSLNLLDEAQDYCQMGLHLGPNNEELKKLDKQIEIKILENEKHEAEVSKAVAEAKELISAMENRGLKIGKAMYRELTGLKKPVLDKSNILHWPVLLLYAEVMSSDFIEDFCETDMFSVHLDMISFYMKYQPLPWDVENNYKREFIELYYEAGSGPRLSKEKLLRYLLEGTAAASSGEVIGDEEKDAVEDLKQNKSSPKWIKVNERKTLHDVLKEPKFVIPEIPVFYVVSKQSSFYSKFKDGKWAPPSVKRINNQYEPIIIMTVYASN* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2574 382 SUPERFAMILY TPR-like 21 150 IPR011990 GO:0005515
Mal1g2574 382 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 1 359 - -
Mal1g2574 382 Coils Coil 141 179 - -
Mal1g2574 382 Gene3D Tetratricopeptide repeat domain 26 159 IPR011990 GO:0005515
Mal1g2574 382 SMART tpr_5 105 138 IPR019734 GO:0005515
Mal1g2574 382 SMART tpr_5 31 66 IPR019734 GO:0005515
Mal1g2574 382 SMART tpr_5 71 104 IPR019734 GO:0005515
Mal1g2574 382 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 1 359 - -
Mal1g2574 382 Pfam Cns1/TTC4 Wheel domain 201 269 IPR044059 GO:0051879
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2574 30 160 Calmodulin-binding Proteins AT3G25230 30.282 2.27e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2574 K24927 - gmx:100783179 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2574 1 35589763 35594285 Mal1g2574 1 35589763 35594285 ECH