Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2564 ATGCAGCTCAAAACTCAGTCTTTCTTCTTCTTCTGTTGCATTTGTTGTGCTGCTGCAGCAGATAATGAAGCATCTGCTTTACTCTCTATAAAAGCAGGTCTCATTGATCCATTGAATAGCCTACATGATTGGAAGGATGCAGGTGCAGCTCAAGGTCATTGTAGCTGGACTGGTGTCCAGTGCAACATGGCTGGAGCTGTAGAGAAGCTTAATCTATCACACATGAATCTGAGTGGTAGTGTCTCAAATGAGATACAAAGTTTAAAAAGTCTAACTTTTTTAAACTTGTGCTGCAATGGATTTGAGTCATCACTTTCAAAACACATAACCAATCTCACCTCACTAAAGAGTCTCGACGTAAGCCAGAATTTCTTCACCGGCGACTTTCCATTAGGCCTTGGAAAGGCGTCCGGACTTGTTACCTTGAATGCATCAAGCAACAATTTCTCAGGTTTTCTGCCTGAGGACCTTGGAAATATCTCTTCCTTAGAGACACTTGATCTTAGAGGCAGCTTCTTTGAAGGGTCTATTCCAAAATCCATCAGTAACTTGAGTAATCTGAAGTACCTTGGTCTATCTGGGAATAATCTCACTGGGAAAATCCCGGTTGAGATTGGAAAACTTTCGTCGCTGGAGTATATGATCATCGGTTATAACGAATTTGAAGGTGGAATCCCGAAAGAGTTTGGAAATTTAACCGAGCTAAAGTATCTTGATTTAGCAGAAGGAAATGTTGGTGGTGAAATTCCTGGTGAGTTGGGAAAACTCAAGTTATTGAACACAGTTTTCTTGTACAAAAACAGTTTTGAAGGAAAAATTCCATCAACTATTGGAAACATGACTTCATTGGTGCTGTTGGATCTCTCAGACAACATGTTATCAGGAAATATTCCAGCTGAAATAAGTCAGCTGAAGAATTTGCAGCTGTTGAACTTCATGAGGAACAAGCTATCTGGTCCTGTGCCTTCTGGCCTTGGAAATTTGCCTCAGATAGAGGTTCTTGAGCTGTGGAACAATTCCTTGTCAGGGCCATTACCTAGTGACCTTGGCGAGAATTCGTCATTGCAGTGGTTGGACGTATCGTCCAATTCACTCTCCGGCGAGGTTCCAGAAACTCTTTGCACCAAGGGCAATCTCACCAAGCTTATACTTTTCAACAATGCCTTCAAGGGTCCAATTCCATCAAGCCTATCAAAATGTGCTTCCCTCGTTCGCGTTCGGATTCAAAACAATTTTCTTTCTGGTACAATTCCTGTTGGTTTTGGTAATCTTGAGAAGCTTCAGAGGTTAGAATTGGCTAACAATAGTCTCACTGGTGGAATTCCTGATGATATTGCTTCTTCCACGTCTCTTTCATTCATTGATTTCTCCAGAAACAACCTCAGCGCTTCTCTTCCTTCCACCGTTATTTCCATACCGAATCTTCAGACATTCATCGTCTCCGAAAACAATCTCCAAGGTGATATTCCAAACCAATTCCAAGACTGTCCCTCACTTGGAGTTTTGGATCTCTCATCAAACTTTTTCTCTGGAGTCATTCCAGAAAGCATTGCTTCATGTCAGAAATTGGTAAAGTTGAGCCTACAGAACAACCGATTGACCGGCGGCATACCAAAAGCTATAGCAAGCATGCCTACATTGTCCATTCTTGATCTTGCTAACAACTCTCTAACTGGTCAAATACCTGATAACTTTGGTATGTCTCCAGCTCTGGAAACATTCAATGTCTCATACAACAAGTTAGAAGGTCCTGTCCCGGAAAATGGCATGCTAAGAGCAATAAATCCAAATGATCTTGTGGGAAATGCTGGCCTATGTGGTGGTCTCTTCCCTCCATGTGGAAAAGCCTCAGCATATACAATAAGGCACGGAAGCTCGCATGCAAAGCGCATTATTGTAGGATGGATAATTGGAATAGCGTCCATCTTGGCCATTGGAGTTGCTGCTTTTGTAGCAAGATCCATATACATGAAGTGGTACACTGAAGGATTGTGCTTCCGAGGTCGATTTTATAGAGGTGGCAAGGGATGGCCTTGGAGATTGATGGCATTTCAGAGACTCGATTTTACAAGTACTGATATCTTATCATGCATCAAGGAAACAAATGTGATAGGCATGGGAGCAACCGGCGTGGTTTATAAGGCTGAGGTACCACAATCAAGTACAGTTGTGGCAGTAAAAAAACTGTGGAGATCAGGATCTGATATTGAAGTAGGAAGTAGCGATGATCTTGTTGGAGAGGTAAATCTTTTAGGAAGGCTAAGGCATAGGAACATTGTTAGACTACTAGGGTTTCTTTATAATGACACTGATGTGATGATAGTTTACGAATTTATGGTCAATGGAAACCTTGGAGATGCCTTGCATGGTAAACAATCAGAGAGATTGCTTGTAGACTGGGTTTCGCGATATAACATAGCTCTAGGAATCGCACAAGGACTCGCTTATCTTCATCATGACTGTCATCCACCTGTTATCCATCGAGACATAAAGTCGAATAACATACTTCTTGATGCAAATCTTGACGCAAGAATCGCAGATTTCGGGTTAGCTAAGATGATGGTCCACAAGAATGAAACAGTCTCCATGATTGCTGGTTCCTATGGATACATTGCCCCTGAATATGGATACTCCTTGAAGGTAGATGAAAAGATTGACATTTACAGCTTTGGAATAGTTTTGTTGGAGCTTATTACAGGAAAGCGGCCTATAGATCCGGAGTTTGGAGAATCTATAGACATCGTAGGGTGGATTAGACGGAAGATAGACAAAAATTCTCCAGAAGAGGCATTAGATCCAAGTGTAGGAAACTGTAAGCATGTTCAAGAAGAGATGCTTTTAGTTCTCAGAATAGCACTTCTTTGCACTGCCAAGCTACCTAAGGAAAGACCCTCCATGAGGGATGTTATAATGATGCTAGGAGAGGCAAAACCAAGGAGAAAAAGTGGCAAGAACAAGGAAACCTTAACTGCTAACAAAGAGATGCATGTAATTAGCAAATCACCGGTTAATGGCCCTCATTAG 3024 0.4177 MQLKTQSFFFFCCICCAAAADNEASALLSIKAGLIDPLNSLHDWKDAGAAQGHCSWTGVQCNMAGAVEKLNLSHMNLSGSVSNEIQSLKSLTFLNLCCNGFESSLSKHITNLTSLKSLDVSQNFFTGDFPLGLGKASGLVTLNASSNNFSGFLPEDLGNISSLETLDLRGSFFEGSIPKSISNLSNLKYLGLSGNNLTGKIPVEIGKLSSLEYMIIGYNEFEGGIPKEFGNLTELKYLDLAEGNVGGEIPGELGKLKLLNTVFLYKNSFEGKIPSTIGNMTSLVLLDLSDNMLSGNIPAEISQLKNLQLLNFMRNKLSGPVPSGLGNLPQIEVLELWNNSLSGPLPSDLGENSSLQWLDVSSNSLSGEVPETLCTKGNLTKLILFNNAFKGPIPSSLSKCASLVRVRIQNNFLSGTIPVGFGNLEKLQRLELANNSLTGGIPDDIASSTSLSFIDFSRNNLSASLPSTVISIPNLQTFIVSENNLQGDIPNQFQDCPSLGVLDLSSNFFSGVIPESIASCQKLVKLSLQNNRLTGGIPKAIASMPTLSILDLANNSLTGQIPDNFGMSPALETFNVSYNKLEGPVPENGMLRAINPNDLVGNAGLCGGLFPPCGKASAYTIRHGSSHAKRIIVGWIIGIASILAIGVAAFVARSIYMKWYTEGLCFRGRFYRGGKGWPWRLMAFQRLDFTSTDILSCIKETNVIGMGATGVVYKAEVPQSSTVVAVKKLWRSGSDIEVGSSDDLVGEVNLLGRLRHRNIVRLLGFLYNDTDVMIVYEFMVNGNLGDALHGKQSERLLVDWVSRYNIALGIAQGLAYLHHDCHPPVIHRDIKSNNILLDANLDARIADFGLAKMMVHKNETVSMIAGSYGYIAPEYGYSLKVDEKIDIYSFGIVLLELITGKRPIDPEFGESIDIVGWIRRKIDKNSPEEALDPSVGNCKHVQEEMLLVLRIALLCTAKLPKERPSMRDVIMMLGEAKPRRKSGKNKETLTANKEMHVISKSPVNGPH* 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2564 1007 PANTHER UNNAMED PRODUCT 3 989 - -
Mal1g2564 1007 SMART LRR_typ_2 328 352 IPR003591 -
Mal1g2564 1007 SMART LRR_typ_2 424 448 IPR003591 -
Mal1g2564 1007 SMART LRR_typ_2 184 208 IPR003591 -
Mal1g2564 1007 SMART LRR_typ_2 544 567 IPR003591 -
Mal1g2564 1007 SMART LRR_typ_2 112 136 IPR003591 -
Mal1g2564 1007 SMART LRR_typ_2 280 304 IPR003591 -
Mal1g2564 1007 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 989 - -
Mal1g2564 1007 SMART serkin_6 698 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g2564 1007 SUPERFAMILY Protein kinase-like (PK-like) 691 973 IPR011009 -
Mal1g2564 1007 Gene3D Ribonuclease Inhibitor 268 373 IPR032675 -
Mal1g2564 1007 ProSitePatterns Serine/Threonine protein kinases active-site signature. 825 837 IPR008271 GO:0004672|GO:0006468
Mal1g2564 1007 Pfam Protein kinase domain 700 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g2564 1007 ProSiteProfiles Protein kinase domain profile. 698 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g2564 1007 Gene3D Phosphorylase Kinase; domain 1 698 782 - -
Mal1g2564 1007 Pfam Leucine rich repeat 473 533 IPR001611 GO:0005515
Mal1g2564 1007 Pfam Leucine rich repeat 162 220 IPR001611 GO:0005515
Mal1g2564 1007 Pfam Leucine rich repeat 402 461 IPR001611 GO:0005515
Mal1g2564 1007 Pfam Leucine rich repeat N-terminal domain 20 62 IPR013210 -
Mal1g2564 1007 ProSitePatterns Protein kinases ATP-binding region signature. 704 728 IPR017441 GO:0005524
Mal1g2564 1007 SUPERFAMILY L domain-like 51 299 - -
Mal1g2564 1007 Gene3D Transferase(Phosphotransferase) domain 1 783 1000 - -
Mal1g2564 1007 SUPERFAMILY RNI-like 265 583 - -
Mal1g2564 1007 Gene3D Ribonuclease Inhibitor 374 614 IPR032675 -
Mal1g2564 1007 Gene3D Ribonuclease Inhibitor 171 267 IPR032675 -
Mal1g2564 1007 Gene3D Ribonuclease Inhibitor 19 170 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2564 Mal-Chr1 35419609 35422769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2564 8 1005 Receptor kinase-like Gene Family AT1G08590 60.451 0.0 1175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal1g2564 Pkinase 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2564 - - gmx:100788430 1681.38