Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2557 ATGGCGGGGGAAGACAAGAATAGCAACAACACAGTCGCAGTCACAGTGACAGGGGAGGAATCAATTCCCGACGATCGAGAAACAATCCCTACTCCCGATGACGCGGCACCTGTTGATGCTGCTGCTCCTCCGGCAAAGAAACGCGGCAGAAAGAGAAAAACAGAGAAGGAAGCCGAAACAGTCGAAGCTGTGAGAAAGAGTGAACGTCCCAGGAAGAGTATATCTCTGAAGGAGGACTACGTGTCAGATGTGGAGGAGGAACTAGAATTGAAGAAGAAGGGGAAACGTGGTAGGAAGAAGAAAGTGACAATCGGTGTTGGTGTTTCTGATGAAATCATTGCTGCTGCACAAGAGGGGGAGAATGTGAAACCTGAATGCATTGAACAGGTGCCAAAAATCAACAAGAGAAATTCCAAGGGGATTGAAAATGAGTCATTATTGGGAAATAAGGACACTAATTGCCATCAATGTAAAAGAAATGACAAGGGCAGGGTTGTCAAATGCACAAAATGCAAACGCAAAAAATTTTGCATACCCTGCATTACCAGTTGGTATCCTCACTTGAAAGAGGAGGACATTGCTGAGGCATGTCCGGGGTGCCGTGGTAATTGCAATTGCAAAGCATGCTTGCAATCATGTGTACTTATCAAGGGAATTCAAAAGAAGTCAGAAATCAACAACGACCATGACGTTGAGCTCTCCAAGTATATGCTGAAACTAATTCTTCCGTATTTAAGACGATTGGATGAAGAACAAATGGCTGAGAAGGAGATAGAAGCAAAGAGACAAGGGCTCTCATGTTCTGAGCTAAATATAAAAGTTGCAGTTGTCCCTAAAAATGAGCGTGTGTACTGTGACAACTGCAAAACGTCAATATTCGACTACCACAGAAGCTGTACAAAATGCTCTTTTGACATTTGTCTCCTTTGTTGCTGTGAGCTTCGTGGTGGGAAGCTTCTAGGTGGTGAAGATCCAATGGAGTTTGAGTTTATCTTCCGAGGGCGTGATTATCTGCATGGTGGAAAGGAAGTGACAGTAAATGAAAATGAACCTCATGCTGCTGCCCAACCCGAGATTCGTGAATGGTCAAGATCTGGGTGGCTTGCAGATAGTGATGGTAGCATTCCCTGTCCAAAAGCCGATGATGATTGTGATCATGGTTTCCTTGAACTGAGAAGTATACTTCCACAAAATTGCATCTCTGAGTTAGTATGTAAAGCAGAAGAACATGAAGAAACAATTAAGCATCAAGATGCAGAGACTTCTGATAGTAGGTGTTCTTGTTTGAAGCCTGTTGTGAATGCATCTGATATCCGCAATAACACAAGGAAGGCAGCTTGTCGTGAAGATTCCAGTGAAAACTTCTTATACTGTCCCAAGGCAGTAAATCTACATCATGAGGATTTAAGGCATTTTCAATGGCACTGGAGCAAAGGGGAGCCTATAATTGTCAGCAATGTACTTGAATGTACATCTGGTTTAAGCTGGGAACCGCTTGTCATGTGGCGTGCATTCCGTCAAATAAGTAATACCAAGCAGAAAACACTTTTGGATGTTAAAGCTCTTGATTGCTTAGATTGGTGTGAGGGAGATATTAATGTGCACAAATTCTTTACTGGGTACACAAATGGTCGCCAGGATTGGCTTAATTGGCCTCAGGTTTTGAAACTGAAGGATTGGCCTCCTTCTAATTTATTTGAGGAAAGTTTGCCCCGTCATTGTGCCGAATTCATATCTTCCTTGCCGTTTAAAGAATATACAGATCCTTTCAAAGGTGTTCTTAACCTTGCTGTGAAGTTGCCTGACGGTGTTCTAAAGCCAGACATGGGCCCAAAAACTTATATTGCTTATGGATTTGCTCAGGAGTTTGGGCGGGGTGATTCTGTGACTAAGCTCCATTGTGATATGTCTGATGCGGTAAATGTGTTGACTCATATTGCTGAAGTGAAATTGGATTCTGAGGGCATTGCTGCCATTAAAAAACTGACGCAAAAGCACCTTGAGCAAGACAAGAGGGAGCTACATGGTGATAACCGAGATGGAGAGACCAACATTGACATGCTTGATAATTCATCTTCCATAAATGCTTTAGACGGTGCTCTCTGGGATATTTTTCGGAGAGAGGATGTACCTAAATTGGAAGAATATATAAAGAAGCATTTCAGAGAGTTCAGGCATGTCCATTGCTCTCCTTTAAAGCAGGTTGTTCACCCCATCCATGATCAGCACTTTTATTTGACTATCGAGCATAAAAAGAGGCTTAAGGAGGAGTATGGAATTGAACCCTGGACTTTTGTTCAGAAGCTGGGAGATGCTGTTTTCATTCCAGCTGGTTGTCCCCACCAAGTCCGAAATCTGAAGTCATGCACCAAGGTTGCACTTGATTTTGTCTCTCCTGAAAATGTTGGTGAGTGCTTTCGTTTGACAGAGGAATTCCGCAAACTTCCAGTAGATCACAAGTCCGCAGAGGACAAATTGGAGGTGAAGAAAATGATTATATATGCTATGCTTGATCTGGTCAAGAAGTTGGAGAAAGCAAGGTCTGGAGAAACCAAGGTTCCAATGTAA 2568 0.4291 MAGEDKNSNNTVAVTVTGEESIPDDRETIPTPDDAAPVDAAAPPAKKRGRKRKTEKEAETVEAVRKSERPRKSISLKEDYVSDVEEELELKKKGKRGRKKKVTIGVGVSDEIIAAAQEGENVKPECIEQVPKINKRNSKGIENESLLGNKDTNCHQCKRNDKGRVVKCTKCKRKKFCIPCITSWYPHLKEEDIAEACPGCRGNCNCKACLQSCVLIKGIQKKSEINNDHDVELSKYMLKLILPYLRRLDEEQMAEKEIEAKRQGLSCSELNIKVAVVPKNERVYCDNCKTSIFDYHRSCTKCSFDICLLCCCELRGGKLLGGEDPMEFEFIFRGRDYLHGGKEVTVNENEPHAAAQPEIREWSRSGWLADSDGSIPCPKADDDCDHGFLELRSILPQNCISELVCKAEEHEETIKHQDAETSDSRCSCLKPVVNASDIRNNTRKAACREDSSENFLYCPKAVNLHHEDLRHFQWHWSKGEPIIVSNVLECTSGLSWEPLVMWRAFRQISNTKQKTLLDVKALDCLDWCEGDINVHKFFTGYTNGRQDWLNWPQVLKLKDWPPSNLFEESLPRHCAEFISSLPFKEYTDPFKGVLNLAVKLPDGVLKPDMGPKTYIAYGFAQEFGRGDSVTKLHCDMSDAVNVLTHIAEVKLDSEGIAAIKKLTQKHLEQDKRELHGDNRDGETNIDMLDNSSSINALDGALWDIFRREDVPKLEEYIKKHFREFRHVHCSPLKQVVHPIHDQHFYLTIEHKKRLKEEYGIEPWTFVQKLGDAVFIPAGCPHQVRNLKSCTKVALDFVSPENVGECFRLTEEFRKLPVDHKSAEDKLEVKKMIIYAMLDLVKKLEKARSGETKVPM* 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2557 855 MobiDBLite consensus disorder prediction 52 73 - -
Mal1g2557 855 Pfam JmjC domain, hydroxylase 700 796 IPR003347 -
Mal1g2557 855 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 150 212 IPR018866 -
Mal1g2557 855 ProSiteProfiles Zinc finger RING-type profile. 154 201 IPR001841 -
Mal1g2557 855 MobiDBLite consensus disorder prediction 1 73 - -
Mal1g2557 855 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 43 846 IPR045109 GO:0032454|GO:0033169
Mal1g2557 855 ProSiteProfiles JmjC domain profile. 589 813 IPR003347 -
Mal1g2557 855 SMART cupin_9 570 813 IPR003347 -
Mal1g2557 855 Coils Coil 400 420 - -
Mal1g2557 855 MobiDBLite consensus disorder prediction 1 17 - -
Mal1g2557 855 SUPERFAMILY Clavaminate synthase-like 466 834 - -
Mal1g2557 855 Gene3D Cupin 454 822 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2557 Mal-Chr1 35360807 35372568 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mal1g2557 JmjC 2.6e-15 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2557 K15601 - mnt:21406437 873.233