Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2550 ATGGCCTCAATAGCCTTAACCACTGGTACTCACTCCCGAAATGGACACCGTTTCTCGGTCTTTGATGACTCAGATGAGGAAAATGGAGACTGCAATATTCAACAGCAACGGAAACACGGTGATTATGCTTTCTCTTTGGCTGGAAGTGTAGCTAGTAAGGATTTTGAAGAGCAGAAACCATTCAACTATAACGAAGAGAAAGGGAAAGGAAAGAAAGAAAAAAGAAGTCTTATGAGCAATGACATAGAAGAAGATGACTACCTTTTGGCTGAGTCAAGGCAACCATTATGGCGCAAAGTACCAGTAGCTTCGAGTCTAATCAACCCATATCGCATAGTCATAGTCATGCGTCTCGTTGTCCTAGTTTTCTTCTTCCACTTCCGCATCACAACTCCGGTGCACGATGCATTCGCGTTATGGATAATCTCTGTGGTCTGTGAAATATGGCTCTCTTTGTCTTGGATAGTAGACCAATTCCCCAAATGGTTCCCCATGACTCGCGAAACTTACTTGGAGCGCTTGTCCATGAGGTTCGAGCGCGAAGGGGAGCCGAACCTTTTAGCCGCAGTTGATGTCTTTGTTACCACCGCAGACCCTTTGAATGAACCACCTATTATAACAGCAAACACAGTTCTATCAGTTCTGTCTGTTGATTATCCTATTGACAAGGTTAGCTGCTATGTCTCCGATGACAGTGCATCTATGCTTCTCTTTGATACATTGACAGAAACTTCTCAGTTTGCAAGGATATGGATTCCATTTTGTAAAAATTATAACATTGAGCCAAGGGCACCTGAGTCTTATTTCTCTCAGAAAGTTGATTACTTGAAAGACAAGGTACATCCTACATTTGTAAAGGATCGCAGGGCTATGAAGAGAGAGTATGAAGAATTCAAGGTGAGAATTAATTTACTGGTTGCCAAGTCTCAGAAAAAACCAGAAGAGGGATGGGTGCTGCAAGATGGTACTCCATGGCCTGGGAACAACACCGACGATCATCCAGGAATGATTCAGGTGTGTTTGGGAAGTGCTGGTGCTCTAGACAATGAAGGCAAGTCGCTGCCACGGCTTGTGTATGTTTCACGTGAGAAATGTTCCGGCTATCAACACCATAACAAAGCTGGAGCCATGAATTCTCTGCTTCGAGTTTCTGCTGTTCTTAGCAATGCACCTTTTGTGTTGAATCTGGATTGTGATCAATACATCAATAATAGCAAGGCTCTTAGGGAGGCTATGTGCTTTCTAATGGACCCTCTACTTGGAAAGAAGACCGCTTATGTCCAATTTCCGCGAAGATTTGATGGCATCGACGATAATGATAGATATGCTAACCACAATACCGTATTCTATGATATCAACATGAAATGCCTTGATGGAATTCAAGGTCCAGTGTATGTTGGTACTGGATGTGTGTTCAACAGGCAGGCATTATATGGCTATAAGCCACCATCTGACAAAAGGCGAAAGACAAACTTTTCATGTTGCTGCTGTTGTTCTGGTGACTCTCGGTCAGCATTGGACATTGAAGAGATTGATGATGGACTTGAAGACTATGATGAGCAAGAGGAATCATCGTTCATGTCTGTCAAAGTTTTTGAGAAAAAGTTTGGAGAGTCACCGGTTTTCATTGCTTCTGCATTGATGGAAGATGGTGGACTTCCCAAAGGAACTAATACTCGAATACTGATGAAGGAAGCCATTCATGTTATAAGTGTTGGCTATGACGAGAAAACTGAATGGGGCAAAGAGATAGGGTGGCTTTATGGTTCTGTCACAGAAGACATTCTGACAGGGTTTAACATGCATTGTAGAGGATGGAAATCAGTGTACTGCATGCCGAAAAGAGTGGCTTTTAAAGGATCCGCGCCTATAAACCTATCAGACAGATTACACCAAGTTCTGAAATGGGCTTTGGGTGCTACTCAGATTTTCTTTAGTGGCTATTGCCCATTGTGGTATGGCTATAGTGGAAAACTCAAATTGCTCCAAAGGCTGGCCTACACGAATGCCATCGTTTATCCGTTCTCTTCCATCCCTCTTTTGGTGTACTGCACAATTCCAGCTATTTGTCTTCTGACTGGAAAGTTCATCCTCCCCACTCTAACAAACCTTGCAAGCATTTGGTTAATGACTCTATTTATCTCCATCATTTTAACTTGTGTGCTTGAGCTTCGTTGGAGTAAGGTTAACATTCAAGACTGGTGGCGCAACGAGCAATTCTGGGTCATTGGAGGTGTTTCTGCACACCTTTTTGCAGTGTTTCAAGGCCTCCTTAAAGTTGGAGGACTCGACACTAGTTTCTCAGTGAGAACGAAATCAGCAGACAACTCTGCATTAGGACAGCTCCATCTCTTCAAGTGGACCACTCTTCTCATCCCACCAACAAGTATTGTAATCTTGAATATGGTGGGAATTGTGGCTGGAGTTTCTGAAGCCATTAACAGTGGCTATAACTCATGGGGACTTTTATTTGGGAAGGTTTTTTTCTCTTTGTGGGTCATTGTGCACTTGTATCCTTTCCTCAAAGGTCTACTGGGAAGGCAAAACAGAACTCCTATCATAGTAGTTCTCTGGGCAACACTTCTAGCATTGATTTTCTCGATGATTTGGGTGCGAATTGATATTTTCTTGCCCAAGAAAACAGGCCCTGTACTCACACAATGTGGGGTAGAATGCTGA 2679 0.4304 MASIALTTGTHSRNGHRFSVFDDSDEENGDCNIQQQRKHGDYAFSLAGSVASKDFEEQKPFNYNEEKGKGKKEKRSLMSNDIEEDDYLLAESRQPLWRKVPVASSLINPYRIVIVMRLVVLVFFFHFRITTPVHDAFALWIISVVCEIWLSLSWIVDQFPKWFPMTRETYLERLSMRFEREGEPNLLAAVDVFVTTADPLNEPPIITANTVLSVLSVDYPIDKVSCYVSDDSASMLLFDTLTETSQFARIWIPFCKNYNIEPRAPESYFSQKVDYLKDKVHPTFVKDRRAMKREYEEFKVRINLLVAKSQKKPEEGWVLQDGTPWPGNNTDDHPGMIQVCLGSAGALDNEGKSLPRLVYVSREKCSGYQHHNKAGAMNSLLRVSAVLSNAPFVLNLDCDQYINNSKALREAMCFLMDPLLGKKTAYVQFPRRFDGIDDNDRYANHNTVFYDINMKCLDGIQGPVYVGTGCVFNRQALYGYKPPSDKRRKTNFSCCCCCSGDSRSALDIEEIDDGLEDYDEQEESSFMSVKVFEKKFGESPVFIASALMEDGGLPKGTNTRILMKEAIHVISVGYDEKTEWGKEIGWLYGSVTEDILTGFNMHCRGWKSVYCMPKRVAFKGSAPINLSDRLHQVLKWALGATQIFFSGYCPLWYGYSGKLKLLQRLAYTNAIVYPFSSIPLLVYCTIPAICLLTGKFILPTLTNLASIWLMTLFISIILTCVLELRWSKVNIQDWWRNEQFWVIGGVSAHLFAVFQGLLKVGGLDTSFSVRTKSADNSALGQLHLFKWTTLLIPPTSIVILNMVGIVAGVSEAINSGYNSWGLLFGKVFFSLWVIVHLYPFLKGLLGRQNRTPIIVVLWATLLALIFSMIWVRIDIFLPKKTGPVLTQCGVEC* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2550 892 SUPERFAMILY Nucleotide-diphospho-sugar transferases 201 706 IPR029044 -
Mal1g2550 892 Pfam Cellulose synthase 190 884 IPR005150 GO:0016020|GO:0016760|GO:0030244
Mal1g2550 892 MobiDBLite consensus disorder prediction 16 32 - -
Mal1g2550 892 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 3 892 - -
Mal1g2550 892 MobiDBLite consensus disorder prediction 1 15 - -
Mal1g2550 892 MobiDBLite consensus disorder prediction 1 32 - -
Mal1g2550 892 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 3 892 - -
Mal1g2550 892 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 300 481 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2550 Mal-Chr1 35261079 35265411 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2550 88 892 Cell Wall Biosynthesis AT5G17420 67.488 0.0 1197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2550 K10999 - gmx:100777278 1474.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2550 1 35261079 35265411 Mal1g2550 1 35261079 35265411 ECH