Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2499 ATGGATTTTGATTCTTCATTCTTCCAATACCAAAACCAAAATCAAAACCTTAACACTTCATTTTCAAATTCCTCTTCTTTTTCAGAATCCTTTTCATGGGAAGATTTCTTTAGCTTTAGTGAAGACAATAACAACAAAACTCTTCCCTTGAACCAAAATTCACAAATATTCATGGAATCATCAACCTCTGATTCCATTTCCAATTCCAGCACTTCAAATTCTCAAATCAGCAATGAATCACAAGAAGTTTCATCAAATTCAACACAAATAGTACAATCATCATCACCTAAGAGGCCATACAGAGGAGTTAGAAGAAGACCTTGGGGAAAATTCGCGGCCGAAATAAGAGACTCAACAAGAAACGGTGTTCGAGTTTGGATTGGTACATTTGATACAGCTGAAGCAGCTGCTTTAGCTTATGATCAAGCAGCTTTATCAACAAGAGGATCAATGGCAGTGTTGAATTTTCCTGAACATGTTGTGAGGGAATCATTGAAAGATATGGTGATTAACAAGTCTTGGGAAAAAGATGGTTCTTCTCCTGTTTTGGCACTCAAGAGGAAACACACTTTGAGAAGAAAATCTAAAGCAAGTAATTGCAAAAATACCAAAAGGGTAGAAAGGGAAATGGAGAATAATATTGTTTCACAAAATGTGTTGGTGTTGGAAGATTTGGGTTCTGAATATCTAGACCAACTTCTTAGCTTGAGTACTTCTCAATTCATTTGTTAG 732 0.3579 MDFDSSFFQYQNQNQNLNTSFSNSSSFSESFSWEDFFSFSEDNNNKTLPLNQNSQIFMESSTSDSISNSSTSNSQISNESQEVSSNSTQIVQSSSPKRPYRGVRRRPWGKFAAEIRDSTRNGVRVWIGTFDTAEAAALAYDQAALSTRGSMAVLNFPEHVVRESLKDMVINKSWEKDGSSPVLALKRKHTLRRKSKASNCKNTKRVEREMENNIVSQNVLVLEDLGSEYLDQLLSLSTSQFIC* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2499 243 PANTHER DNA-BINDING DOMAIN 13 237 IPR044808 GO:0003700|GO:0009873
Mal1g2499 243 SUPERFAMILY DNA-binding domain 100 158 IPR016177 GO:0003677
Mal1g2499 243 CDD AP2 100 159 IPR001471 GO:0003700|GO:0006355
Mal1g2499 243 PRINTS Ethylene responsive element binding protein signature 123 139 IPR001471 GO:0003700|GO:0006355
Mal1g2499 243 PRINTS Ethylene responsive element binding protein signature 100 111 IPR001471 GO:0003700|GO:0006355
Mal1g2499 243 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 13 237 - -
Mal1g2499 243 MobiDBLite consensus disorder prediction 60 103 - -
Mal1g2499 243 SMART rav1_2 99 163 IPR001471 GO:0003700|GO:0006355
Mal1g2499 243 Pfam AP2 domain 100 149 IPR001471 GO:0003700|GO:0006355
Mal1g2499 243 Gene3D AP2/ERF domain 99 159 IPR036955 GO:0003700|GO:0006355
Mal1g2499 243 MobiDBLite consensus disorder prediction 60 96 - -
Mal1g2499 243 ProSiteProfiles AP2/ERF domain profile. 99 157 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2499 Mal-Chr1 34563385 34564116 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2499 48 235 AP2-EREBP Transcription Factor Family AT3G23240 48.947 9.59e-53 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal1g2499 AP2 1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2499 K14516 - gmx:100784784 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3839 3 116239886 116240650 Mal1g2499 1 34563385 34564116 PCT