Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2497 ATGGATTTTGATTCTTCATTCTTCCAATTCCAATACCAAAACCTTAACACTTCATTTTCAAATTCCTCTTCTTTTTCAGAATCCTTTTCATGGGAAGATTTCTTTAGCTTTAGTAAAGACAATAACAACAACACTCTTCCCTTGAACCAAAATTCACAAATATTCATGGAATCATCAACCTCTGATTCCATTTCCAATTCCAGCACTTCAAATTCTCAAATCAGCAATGAATCACAAGAAGTTTCATCAAATTCAACACAAATAGTACAATCATCATCACCTAAGAGGCCATACAGAGGAGTTAGAAGAAGACCTTGGGGAAAATTCGCGGCCGAAATAAGAGACTCAACAAGAAACGGTGTTCGAGTTTGGATTGGTACATTTGATACAGCTGAAGCAGCTGCTTTAGCTTATGATCAAGCAGCTTTATCAACAAGAGGATCAATGGCAGTGTTGAATTTTCCTGAACATGTTGTGAGGGAATCATTGAAAGATATGGTGATTAACAAGTCTTGGGAAAAAGATGGTTCTTCTCCTGTTTTGGCACTCAAGAGGAAACACACTTTGAGAAGAAAATCTAATGCAAGTAACAAAAAGACTAAAAGGGTAGAAAGGGAAATGGAGAGTGTTGTTTCACAAAATGTATTGGTATTGGAAGATTTGGGTTCTGAATATCTGGACCAACTTCTTAGCTTGACTTCTTCTCAAGACTTTTGCTAG 720 0.3653 MDFDSSFFQFQYQNLNTSFSNSSSFSESFSWEDFFSFSKDNNNNTLPLNQNSQIFMESSTSDSISNSSTSNSQISNESQEVSSNSTQIVQSSSPKRPYRGVRRRPWGKFAAEIRDSTRNGVRVWIGTFDTAEAAALAYDQAALSTRGSMAVLNFPEHVVRESLKDMVINKSWEKDGSSPVLALKRKHTLRRKSNASNKKTKRVEREMESVVSQNVLVLEDLGSEYLDQLLSLTSSQDFC* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2497 239 ProSiteProfiles AP2/ERF domain profile. 97 155 IPR001471 GO:0003700|GO:0006355
Mal1g2497 239 CDD AP2 98 157 IPR001471 GO:0003700|GO:0006355
Mal1g2497 239 SUPERFAMILY DNA-binding domain 98 156 IPR016177 GO:0003677
Mal1g2497 239 MobiDBLite consensus disorder prediction 59 94 - -
Mal1g2497 239 PANTHER DNA-BINDING DOMAIN 10 233 IPR044808 GO:0003700|GO:0009873
Mal1g2497 239 Gene3D AP2/ERF domain 97 157 IPR036955 GO:0003700|GO:0006355
Mal1g2497 239 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 10 233 - -
Mal1g2497 239 MobiDBLite consensus disorder prediction 59 101 - -
Mal1g2497 239 PRINTS Ethylene responsive element binding protein signature 98 109 IPR001471 GO:0003700|GO:0006355
Mal1g2497 239 PRINTS Ethylene responsive element binding protein signature 121 137 IPR001471 GO:0003700|GO:0006355
Mal1g2497 239 SMART rav1_2 97 161 IPR001471 GO:0003700|GO:0006355
Mal1g2497 239 Pfam AP2 domain 98 147 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2497 Mal-Chr1 34555151 34555870 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2497 46 231 AP2-EREBP Transcription Factor Family AT3G23240 52.128 1.67e-56 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal1g2497 AP2 1e-13 CL0081