Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2495 ATGGAGGGAGATCATAAATCAGCTTCAAATTCAACAAGTGGAAATGGAAATACAGATCAAATAAAGTATAGAGGAATTCGTAGGAGACCATGGGGAAAATTTGCAGCAGAGATTCGTGACCCAACAAGAAAAGGGACAAGAATATGGCTTGGAACTTTTGATACTGCAGAACAAGCTGCAAGAGCTTATGATGCTGCTGCTTTTCATTTTCGTGGTCATAGAGCTATTCTCAATTTCCCTAATGAATATCAAGCTCCTAATTCATCATCTTCTTCTTCTTCATTACCTATGCCTCTTACTATGCCTCCTCCACCTTCTTCTAATCCTTCACCTTCTTCTTCTTCCTCCTTTTCTTCTTACAATGTTGATGATAGTTTTGAGCTTGAATTCTTGGATAATAAGTTGCTTCAAGAACTACTTCAAGATGGCACACAATAG 438 0.3813 MEGDHKSASNSTSGNGNTDQIKYRGIRRRPWGKFAAEIRDPTRKGTRIWLGTFDTAEQAARAYDAAAFHFRGHRAILNFPNEYQAPNSSSSSSSLPMPLTMPPPPSSNPSPSSSSSFSSYNVDDSFELEFLDNKLLQELLQDGTQ* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2495 145 Gene3D AP2/ERF domain 21 81 IPR036955 GO:0003700|GO:0006355
Mal1g2495 145 MobiDBLite consensus disorder prediction 81 120 - -
Mal1g2495 145 PANTHER DNA-BINDING DOMAIN 8 93 IPR044808 GO:0003700|GO:0009873
Mal1g2495 145 MobiDBLite consensus disorder prediction 1 20 - -
Mal1g2495 145 ProSiteProfiles AP2/ERF domain profile. 22 80 IPR001471 GO:0003700|GO:0006355
Mal1g2495 145 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Mal1g2495 145 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Mal1g2495 145 Pfam AP2 domain 22 73 IPR001471 GO:0003700|GO:0006355
Mal1g2495 145 MobiDBLite consensus disorder prediction 81 96 - -
Mal1g2495 145 SUPERFAMILY DNA-binding domain 22 81 IPR016177 GO:0003677
Mal1g2495 145 MobiDBLite consensus disorder prediction 1 26 - -
Mal1g2495 145 CDD AP2 22 81 IPR001471 GO:0003700|GO:0006355
Mal1g2495 145 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF105 8 93 - -
Mal1g2495 145 SMART rav1_2 22 86 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2495 Mal-Chr1 34527995 34528432 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2495 20 140 AP2-EREBP Transcription Factor Family AT3G23230 57.851 2.35e-39 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mal1g2495 AP2 4.9e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2495 - - aip:107628225 148.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3838 3 116210961 116211332 Mal1g2495 1 34527995 34528432 PCT