Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2494 ATGAGTCTCTTCCAAAACCCAGATATGGAAATGCTGCAAGACCCATCAGAAATTTCGTTTGAATCATTTGGTATTCATGATGATCCAATTCAATATTCACTTTCCTTCGATATGGTTGGTTTCTCATCATGTAGTTCAAATGCACCAACAAAAAATGAGTCAAAACAGTTGATGAAGTCACCTAAAGCAAAACAAGAACAAAATAAGATGGATCAAAAGTCATATATAGGTGTGAGGAAAAGACCTTGGGGAAAATATGCTGCAGAAATCAGAGACACAACAAGGGGTGGCAAAAGGGTTTGGCTAGGAACATTTGATAGTGCTGAAGATGCTGCTTTAGCTTATGATCAAGCTGCATTTTCAATGAGAGGTAATAATGCTGTGATCAATTTTTCTGTTCAAAGGGTCAAAGAATCTTTGCAAGAAATTCAATATGATTGCAGAAAAGGATCTTCACCTGCACTTGCACTCAAGGAGAAGCACTATGAGCAAAGAAAGATGTTATCAAAAGGTGTAAAGAATAATAAAGCAGGGAAACATGATCAATCAGAGGGATCATCAAGTGTGTTGGTGTTAGAGGATTTGGGAGTTGAATATCTTGAGCAACTTCTAACAATATCTGATAATCAAAGTACAAGCTCAAGCAACTTCTACTAA 657 0.3668 MSLFQNPDMEMLQDPSEISFESFGIHDDPIQYSLSFDMVGFSSCSSNAPTKNESKQLMKSPKAKQEQNKMDQKSYIGVRKRPWGKYAAEIRDTTRGGKRVWLGTFDSAEDAALAYDQAAFSMRGNNAVINFSVQRVKESLQEIQYDCRKGSSPALALKEKHYEQRKMLSKGVKNNKAGKHDQSEGSSSVLVLEDLGVEYLEQLLTISDNQSTSSSNFY* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2494 218 SUPERFAMILY DNA-binding domain 74 133 IPR016177 GO:0003677
Mal1g2494 218 MobiDBLite consensus disorder prediction 47 72 - -
Mal1g2494 218 PRINTS Ethylene responsive element binding protein signature 75 86 IPR001471 GO:0003700|GO:0006355
Mal1g2494 218 PRINTS Ethylene responsive element binding protein signature 98 114 IPR001471 GO:0003700|GO:0006355
Mal1g2494 218 Pfam AP2 domain 74 124 IPR001471 GO:0003700|GO:0006355
Mal1g2494 218 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 15 33 205 - -
Mal1g2494 218 MobiDBLite consensus disorder prediction 57 72 - -
Mal1g2494 218 ProSiteProfiles AP2/ERF domain profile. 74 132 IPR001471 GO:0003700|GO:0006355
Mal1g2494 218 SMART rav1_2 74 138 IPR001471 GO:0003700|GO:0006355
Mal1g2494 218 CDD AP2 73 131 IPR001471 GO:0003700|GO:0006355
Mal1g2494 218 Gene3D AP2/ERF domain 73 134 IPR036955 GO:0003700|GO:0006355
Mal1g2494 218 PANTHER DNA-BINDING DOMAIN 33 205 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2494 Mal-Chr1 34489635 34490291 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2494 64 212 AP2-EREBP Transcription Factor Family AT3G23240 56.376 2.70e-53 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal1g2494 AP2 3.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2494 K14516 - gmx:100812017 228.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2494 1 34489635 34490291 Mal1g2494 1 34489635 34490291 ECH