Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2491 ATGCATACGATGAGTAGCTCTTTCTTCAATAACCCAGATTTAGAGATGTTGCAACAAGATCCTACTAATATTCTGTTTGAATCATTTCATCATAACCCTATTCATGATTATCTTTCCTTTGACATGGTTGACCAACAAAGACCAAATCAATCAGTGAATAATTCTGAGACTAAAGAAAGATCTTATATTGGTGTGAGGAAAAGACCTTGGGGGAAATATGCAGCAGAGATCAGAGATACAACAAGAGGAGGAAGAAGGGTTTGGCTTGGAACATTTGATAGTGCTGAAGAAGCTGCTTTAGCTTATGATCAAGCTGCATTTTCAATGAGAGGTAACAATGCTGTCCTCAATTTTTCTGTTCAAAGGGTCAAAGAATCTTTGCAAGAGATTCAATATGATTGCAGAAAAGGTTCTTCACCTGCACTTGCACTCAAGGAGAAGCACTGTGAACAAAGAAAGATGTTATCAAAAGCTACAAAGAATAATAAAGCAGCGAAACAAGATCAATCAGAGGGATCATCAAATGTGTTGGTATTAGAGGATTTGGGAGTTGAATATCTTGAGCAACTTCTAACAATATCTGATAATCAAAGTACAAGCAGCAATAGCTACTTCAAATCAACTTATCTGTCTCCCATGTTTCCTTTTATCAGCTCCCTCTCATCTCCTATTCTTTACTTAATTCTATCACTTACATCAATTGATAATGACCTTCCCACTTTCATACACACTTCTAAAATTTGTGTTATTTTTACTTGCTAA 762 0.3583 MHTMSSSFFNNPDLEMLQQDPTNILFESFHHNPIHDYLSFDMVDQQRPNQSVNNSETKERSYIGVRKRPWGKYAAEIRDTTRGGRRVWLGTFDSAEEAALAYDQAAFSMRGNNAVLNFSVQRVKESLQEIQYDCRKGSSPALALKEKHCEQRKMLSKATKNNKAAKQDQSEGSSNVLVLEDLGVEYLEQLLTISDNQSTSSNSYFKSTYLSPMFPFISSLSSPILYLILSLTSIDNDLPTFIHTSKICVIFTC* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2491 253 Gene3D AP2/ERF domain 61 121 IPR036955 GO:0003700|GO:0006355
Mal1g2491 253 PRINTS Ethylene responsive element binding protein signature 85 101 IPR001471 GO:0003700|GO:0006355
Mal1g2491 253 PRINTS Ethylene responsive element binding protein signature 62 73 IPR001471 GO:0003700|GO:0006355
Mal1g2491 253 Pfam AP2 domain 62 111 IPR001471 GO:0003700|GO:0006355
Mal1g2491 253 ProSiteProfiles AP2/ERF domain profile. 61 119 IPR001471 GO:0003700|GO:0006355
Mal1g2491 253 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 49 194 - -
Mal1g2491 253 SUPERFAMILY DNA-binding domain 62 120 IPR016177 GO:0003677
Mal1g2491 253 SMART rav1_2 61 125 IPR001471 GO:0003700|GO:0006355
Mal1g2491 253 PANTHER DNA-BINDING DOMAIN 49 194 IPR044808 GO:0003700|GO:0009873
Mal1g2491 253 CDD AP2 62 118 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2491 Mal-Chr1 34391550 34393713 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2491 41 199 AP2-EREBP Transcription Factor Family AT3G23240 57.669 4.71e-57 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal1g2491 AP2 1.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2491 K14516 - gmx:100812017 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2491 1 34391550 34393713 Mal1g2491 1 34391550 34393713 ECH