Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2489 ATGGAAGAGGAAAATTCAAAGAAGAAGAAGCAAGAGTCACCAAAAGAAATTCGATACCGAGGAGTGAGACGGCGTCCGTGGGGAAAGTTTGCGGCTGAGATTCGGGACCCAGCTCGACACGGTGCTCGCGTGTGGCTAGGTACATTTCTCACGGCGGAGGAAGCTCCAAGAGCTTATGACCGTGCCGCGTTTGAGATGAGAGGTGCTTTAGCAATACTCAATTTTCCACATGAGTACCCTTCTATTAACTCCTCTTCATCATCATTAGCGACTAATTCATCTTCAGCTTCTTGCTCTGAATCTTCATTACCAAGTAACCAAACTGAGCATGGAAAACAAGTAATTGAGTTTGAGTGTTTGGATGATAAATTGTTAGAGGATCTTCTTGATTGTGATGAGAGTGAAATTACTACTCACAAAAACTTGCCGAAGTAG 435 0.4391 MEEENSKKKKQESPKEIRYRGVRRRPWGKFAAEIRDPARHGARVWLGTFLTAEEAPRAYDRAAFEMRGALAILNFPHEYPSINSSSSSLATNSSSASCSESSLPSNQTEHGKQVIEFECLDDKLLEDLLDCDESEITTHKNLPK* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2489 144 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Mal1g2489 144 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Mal1g2489 144 MobiDBLite consensus disorder prediction 82 110 - -
Mal1g2489 144 PANTHER DNA-BINDING DOMAIN 6 133 IPR044808 GO:0003700|GO:0009873
Mal1g2489 144 Pfam AP2 domain 18 68 IPR001471 GO:0003700|GO:0006355
Mal1g2489 144 CDD AP2 18 77 IPR001471 GO:0003700|GO:0006355
Mal1g2489 144 SUPERFAMILY DNA-binding domain 18 78 IPR016177 GO:0003677
Mal1g2489 144 SMART rav1_2 18 82 IPR001471 GO:0003700|GO:0006355
Mal1g2489 144 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
Mal1g2489 144 PANTHER ETHYLENE RESPONSE FACTOR 6 133 - -
Mal1g2489 144 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2489 Mal-Chr1 34374585 34375019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2489 15 133 AP2-EREBP Transcription Factor Family AT3G23230 62.810 2.21e-43 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal1g2489 AP2 1.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2489 - - gmx:100810414 173.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2489 1 34374585 34375019 Mal1g2489 1 34374585 34375019 ECH
Mal1g2489 1 34374585 34375019 Mal3g3828 3 116104317 116104742 PCT