Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2474 ATGAAAAATTCCACAGAAACACCTTCACAATCCTCATACAAAACCAGATCCAAAAAACCCAATCTTCGTAGCTCAAAATCCCTTTTCCAAGATCCAATTGAACTAACTTCAAAAACCCCTGAAAAGCCACCGGAGAAGGCACCGATGCGAACCCGCAACCGCGGCGTTGCGGTTTCGATATCGGATATTAGAAAAGTTGCAAAGGGTCTTCAAGATCAGAAACAACAAAGCCGTGAAACGACGTCGTTGAAGGGCAAATCTGCTAGAAGGCAAATCACATTGTCTTCTCCGTGTAAGAGCAATGCATCGTCCACGCTTCCTGAGAAGTATGAAAATTTGGGGGAATTTTTTGATAGTTTGGATAGTTCAATTCGATTGTTGCGATTAAAAGGATCGATGACTTCATTTACGAATATCAGACCAAAGATTGAAACTTTAACTGATAGGAGGTTTACACATGCTCATTTGGCTCAGTTGAAGTTTATCTTACCTGAGGCGATTGCTATTAAGAAGTTGTTGGTGTTCGATGAACGGACAAGTTGTATGAAGCCGGATCTTCATGTCAGTATAAACCCTGATGCAGTTGAGTTTGATGCTAAGTTGGTGTCTGAATCTGGGACTATGTCTCTGAGGAAGTTGTTTCGTGAACGGCTCAAAGATTTTTGGAAATCTCATCCAGAGGTTGATGATGTTCCAGAGGAAATGCTGCCGGAGCCATTCAGTCGCCCAAAGCAAGATCCTCTTGTACACATGATGAAACCCCCCTCATCATTCTCTGCAGTGACATTATCTGATGCACGTGCTTCTAGTGACATTGCAGATAATACAGACCATGTTAACACAGAAGGATATGTGTCAGTGCCCGCCGAGACATCAGTTGAAACTCTTAGCCAGCAGCCAGCAGTTGCCTCTCATATGTCTCAATCCTTCAAAAGACGGTTTTCTCAGAAATTAAAGGAAAATGTACAGCCACAACTTCCATCGGATTCATTCCAACCCTTAGTTGTGCCAGTTTCAGAATCAAGCTTGAGGATAAATTCCATCTCAGAGGTCACTAAATCCCATCCTAAAATATCACCATCTGAGTTGGTTACAGAATCTTCCAGTAGTGAAGCACGTCCTACGATTCATGGTTCTTCAGACTGCTTCACACCATCCAAAGTTACACTAGTTACACCTAGCAAAACCACCGAGTATACAGAAAGCAAAGATGGGTCCTTCAAAACCGTCGATGCTATGTCGACTCCAGCTAAATTTGTGTCTACCCCATCCAGGCTGATGTCAGCCACACCTGCATTGAAGCCACCTAAAAGAAATTTTATGACCCCGGATGACAACTCTACCAGCTCACCGGACAAGTTGGTTAAGCGCCCACCTCGTTCAAGGTCATTGAAATTTGACACTCCAATGAAAAATGAAAATGATGCTGGTGGTTTGTCAATTGATGATGACATTTTTGATATCCTCCCGGATAATCTTCTCCGTTCGATTAGGGAAAAAGAAAGAATAGCAATGGAGGAAAGGGATCCAGCTATCTCACAAGCTAAGAAGCGGAAGAAAATTATAGCCAGCCTCCCTAAGCTCTTTAACATGATTCACATGATGTTTCATTCAATAAACCGTTCTGTTATCACAAAAGAGGAGCTGATGAGCAAGATAATCTCAAGTCACCGTGATATTGTTGATAGAAGTGAAGTTGAAGAACAGTTTCTTCTGTTGTTAGAATTAGTTCCTGAGTGGATTTCTGAGAAGTTGGCCTCCAGTGGAGATACACTAGTCTCCGTAAATAAAATGTTGAATCCTGAATCCTTAAGAGCATCACTTGAAGAAGCAAAATGA 1839 0.4209 MKNSTETPSQSSYKTRSKKPNLRSSKSLFQDPIELTSKTPEKPPEKAPMRTRNRGVAVSISDIRKVAKGLQDQKQQSRETTSLKGKSARRQITLSSPCKSNASSTLPEKYENLGEFFDSLDSSIRLLRLKGSMTSFTNIRPKIETLTDRRFTHAHLAQLKFILPEAIAIKKLLVFDERTSCMKPDLHVSINPDAVEFDAKLVSESGTMSLRKLFRERLKDFWKSHPEVDDVPEEMLPEPFSRPKQDPLVHMMKPPSSFSAVTLSDARASSDIADNTDHVNTEGYVSVPAETSVETLSQQPAVASHMSQSFKRRFSQKLKENVQPQLPSDSFQPLVVPVSESSLRINSISEVTKSHPKISPSELVTESSSSEARPTIHGSSDCFTPSKVTLVTPSKTTEYTESKDGSFKTVDAMSTPAKFVSTPSRLMSATPALKPPKRNFMTPDDNSTSSPDKLVKRPPRSRSLKFDTPMKNENDAGGLSIDDDIFDILPDNLLRSIREKERIAMEERDPAISQAKKRKKIIASLPKLFNMIHMMFHSINRSVITKEELMSKIISSHRDIVDRSEVEEQFLLLLELVPEWISEKLASSGDTLVSVNKMLNPESLRASLEEAK* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2474 612 Pfam DNA replication factor Cdt1 C-terminal domain 492 584 IPR032054 -
Mal1g2474 612 MobiDBLite consensus disorder prediction 455 469 - -
Mal1g2474 612 MobiDBLite consensus disorder prediction 73 105 - -
Mal1g2474 612 CDD Cdt1_m 94 239 IPR014939 -
Mal1g2474 612 SUPERFAMILY "Winged helix" DNA-binding domain 102 240 IPR036390 -
Mal1g2474 612 MobiDBLite consensus disorder prediction 1 105 - -
Mal1g2474 612 SMART CDT1_2 106 238 IPR014939 -
Mal1g2474 612 MobiDBLite consensus disorder prediction 426 475 - -
Mal1g2474 612 CDD Cdt1_c 488 609 IPR032054 -
Mal1g2474 612 PANTHER DNA REPLICATION FACTOR CDT1 34 612 IPR045173 GO:0003677|GO:0030174|GO:0071163
Mal1g2474 612 Gene3D - 483 612 IPR038090 -
Mal1g2474 612 Pfam DNA replication factor CDT1 like 106 224 IPR014939 -
Mal1g2474 612 MobiDBLite consensus disorder prediction 354 381 - -
Mal1g2474 612 MobiDBLite consensus disorder prediction 1 34 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2474 414 610 Core DNA Replication Machinery Family AT2G31270 50.943 2.44e-55 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2474 K10727 - gmx:100778818 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2474 1 34160410 34163215 Mal1g2474 1 34160410 34163215 ECH