Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2466 ATGGCTGGCTCTGGTTCTGTTTCTTCTGGTTCTCCTTGTGGAGCCTGCAAATTTTTGAGAAGAAAATGTATAAGAGGTTGTGTTTTTGCACCATATTTTTCGCATGAACAAGGTGCTACACATTTTTCAGCCATTCATAAGGTTTTTGGTGCAAGCAATGTCTCAAAGCTTCTTGCTCATCTCCCTGTAAGTGATCGTTGTGAAGCCGCTGTTACAATCTCTTATGAAGCTCAAGCTAGACTTCAAGATCCTATTTATGGATGTGTTTCACATATTTTTGCCCTCCAACAACAGGTGGTCAATTTACAAACACAACTGGCTTATCTCAAAGAACAAGCAGCACAAACTTGTCCTAATAATGCATCTACCATTGAAAACCCTAATGAAAAATTTAATTCTCTTACTCTTCCTCAAGATCTTCAAACTTGGTTCCATGTGGAAAATTCAAGTAATCACCAACTTGGGCAAGAATTTCTTACTAATAACTTGTCTAATATTTCCTTAGCAACACAATATTATGGGAACAATACTCTCAATATGGATCTAGACCCTATGAGGAATTATGAAAATTCAAGAGACATGGAAGAAAACACTTCATTTTCTAGCTTTGAGGAGAGTACTTCTAATTCCATGCAAACAAACAGGAGGACATGGGGATTTGATGAAGTCGAGGACCTACATTCAGTGCCTTTTGGATACAGTTGA 705 0.3773 MAGSGSVSSGSPCGACKFLRRKCIRGCVFAPYFSHEQGATHFSAIHKVFGASNVSKLLAHLPVSDRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQTQLAYLKEQAAQTCPNNASTIENPNEKFNSLTLPQDLQTWFHVENSSNHQLGQEFLTNNLSNISLATQYYGNNTLNMDLDPMRNYENSRDMEENTSFSSFEESTSNSMQTNRRTWGFDEVEDLHSVPFGYS* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2466 234 Coils Coil 92 112 - -
Mal1g2466 234 PANTHER LOB DOMAIN CONTAINING PROTEIN 3 233 - -
Mal1g2466 234 PANTHER LOB DOMAIN-CONTAINING PROTEIN 17-RELATED 3 233 - -
Mal1g2466 234 Pfam Lateral organ boundaries (LOB) domain 12 110 IPR004883 -
Mal1g2466 234 ProSiteProfiles LOB domain profile. 11 113 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2466 Mal-Chr1 33881397 33882366 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2466 12 233 AS2 family AT3G58190 51.754 1.58e-69 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal1g2466 LOB 7.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2466 K13945 - gmx:100776678 316.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2466 1 33881397 33882366 Mal1g2466 1 33881397 33882366 ECH
Mal3g3823 3 116017451 116018603 Mal1g2466 1 33881397 33882366 PCT