Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2463 ATGGCTTCTGCAAATGGCTCTAGCCCTAGCTCCTCAGCCTCAGGATCTCCATGTGGGGCATGCAAGTTCCTCCGTAGAAAGTGTACTTCTGAATGCATATTTGCACCTTATTTTTGTTGTGAACAAGGACCAGCTAGATTTGCAGCCATTCATAAGGTGTTTGGAGCTAGCAATGTTTCCAAGATGCTACTGAATATACCTGCTCATGATCGTCCTGATGCTGTTGTCACAATTGCTTATGAAGCTCAAGCTCGTATTATAGATCCTGTTTATGGTTGTGTCTCCCATATATTTGCTTTACAACAACAGGTAGCAAGCTTGCAAGCACAACTGATGCAAGTGAAGGCACAACAAATTAGTCAAAGCTTAAAGGAGTCAAGGAACTTGGAGAATCAATGGTCAGGAAATGTTGCTAGACGACAATTAATCAATCCATTTTGTCCAACAAATATGAACCCTATATCTCCTACGAGCTCGCTTAATTCAATTGATTTTGGCAACTGCAGCATCAATGATGGAATGAGCATGCAAGACATACAATGCCAAGATTATTCTACTAAAAGAATGTCATATGATTTGGGAATGATTGGGAACTATAATTAA 603 0.4013 MASANGSSPSSSASGSPCGACKFLRRKCTSECIFAPYFCCEQGPARFAAIHKVFGASNVSKMLLNIPAHDRPDAVVTIAYEAQARIIDPVYGCVSHIFALQQQVASLQAQLMQVKAQQISQSLKESRNLENQWSGNVARRQLINPFCPTNMNPISPTSSLNSIDFGNCSINDGMSMQDIQCQDYSTKRMSYDLGMIGNYN* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2463 200 Pfam Lateral organ boundaries (LOB) domain 17 115 IPR004883 -
Mal1g2463 200 ProSiteProfiles LOB domain profile. 16 118 IPR004883 -
Mal1g2463 200 PANTHER LOB DOMAIN-CONTAINING PROTEIN 16 8 185 - -
Mal1g2463 200 PANTHER LOB DOMAIN CONTAINING PROTEIN 8 185 - -
Mal1g2463 200 Coils Coil 97 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2463 Mal-Chr1 33769564 33771719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2463 2 197 AS2 family AT2G42430 52.294 1.12e-62 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal1g2463 LOB 1.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2463 K13944 - gmx:100801508 252.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2463 1 33769564 33771719 Mal1g2463 1 33769564 33771719 ECH
Mal3g3822 3 116006694 116007849 Mal1g2463 1 33769564 33771719 PCT