Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal1g2459 | ATGGAAGGAAATTACTACCTGAACAAAAACACAACTACGACTCATAGAGATCATGATCATCATCATCATCACAACTTGGGATTTGAGGAGCATTCATGGGGAACATCATGGCCAGCAAGAAACTATGCTTGTAGTTTTTGCAAAAGAGAGTTTAGGTCAGCTCAAGCTTTAGGTGGACATATGAATGTTCATAGAAGAGATAGGGCAAGATTAAGATCATCATTAATATCTTCTTGGGTTAATTCTGATCAATGCCCTAATAATAATATTAATAATAATAAACCTAACCCTACCATTACCACAACTACTACTTCTTCTTCTCCACTTTATCTCTCTTTATCTTCTCCTTCACCTTCCTTAGCTCATACTAGCCATGATGATAAGAAACCAAGATTAACACCTTCTCTATCTCTTCCTCTTTTGAATCCTCAAAGAAGTGAAAAAATCATAATGAGTAAGACCATGAAGAGCTATGATGAAGAGGTGAAGAAGCACAATGTTTTGATGAATAATGAGCAAAACATTACACTTGAGTTAGGAATAGGTTTGTTTAATCACCAAGAAGAGAAGTTAGATTTGGAGCTTCGACTCTAG | 594 | 0.3569 | MEGNYYLNKNTTTTHRDHDHHHHHNLGFEEHSWGTSWPARNYACSFCKREFRSAQALGGHMNVHRRDRARLRSSLISSWVNSDQCPNNNINNNKPNPTITTTTTSSSPLYLSLSSPSPSLAHTSHDDKKPRLTPSLSLPLLNPQRSEKIIMSKTMKSYDEEVKKHNVLMNNEQNITLELGIGLFNHQEEKLDLELRL* | 198 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal1g2459 | 197 | SUPERFAMILY | beta-beta-alpha zinc fingers | 39 | 68 | IPR036236 | - | |
| Mal1g2459 | 197 | SMART | c2h2final6 | 42 | 64 | IPR013087 | - | |
| Mal1g2459 | 197 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 44 | 64 | IPR013087 | - | |
| Mal1g2459 | 197 | Gene3D | Classic Zinc Finger | 12 | 95 | - | - | |
| Mal1g2459 | 197 | MobiDBLite | consensus disorder prediction | 82 | 121 | - | - | |
| Mal1g2459 | 197 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 42 | 69 | IPR013087 | - | |
| Mal1g2459 | 197 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Mal1g2459 | 197 | MobiDBLite | consensus disorder prediction | 82 | 139 | - | - | |
| Mal1g2459 | 197 | Pfam | C2H2-type zinc finger | 42 | 66 | - | - | |
| Mal1g2459 | 197 | PANTHER | TRANSCRIPTIONAL REGULATOR SUPERMAN | 8 | 197 | - | - | |
| Mal1g2459 | 197 | PANTHER | OS07G0101800 PROTEIN | 8 | 197 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mal1g2459 | Mal-Chr1 | 33669660 | 33670253 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mal1g2459 | 1 | 197 | C2H2 Transcription Factor Family | AT3G23130 | 36.279 | 3.56e-26 | 98.2 |