Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2458 ATGGGCATGCCTGAAAACATAATTGTCGGTTCTCATGTTTGGGTTGGCGATCCAGAATTAGTTTGGATTGATGGAGTAGTACTGAGTATTAATGGAGAAGAAGCTGAAATTCAAACTAGCAACGAGAAGAAGGTAGTTTCCCGTTTGTCAAAATTACATCCCAAGGATACAGATGCTCCTACAGATGGCGTTGATGACATGACCAAGCTTGCTTATTTGCATGAGCCAGGAGTGCTGTATAATTTGGAAAATCGTTACAAGATCAATGAAATATATACTTATACTGGAAATATTCTTATTGCGATCAATCCCTTTCAAAGTCTTCCACACCTGTATGATGCTAATGCAATGAAAAGATACAAGGGAGAGAGAATCGGAAATTTAAGCCCACATGTTTTTGCTATTGCTGAAGCAGCATATAGGGCTATGATTACTGAGGAGAAGAGCAACTCTATTCTTGTTAGTGGTGAGAGTGGCGCTGGTAAGACAGAAACCACCAAAATGCTTATGCTTTACTTGGCTTATTTGGGTGGTCACACTGCATCTGAAGGACGGACTGTTGAGCAACAAGTTCTAGAATCAAACCCAGTTCTTGAAGCATTTGGTAATGCAAAAACAGTTAGAAATGACAATTCCAGCCGTTTTGGAAAATTTGTTGAGATTCAATTTGATAAGTATGGACGAATATCCGGTGCAGCTATTAGAACTTATCTGCTCGAGAAATCTCGCGTTTGCCAAATCTCAGATCCAGAGCGTAATTATCACTGTTTCTACCTTCTCTGTGCTTCTCCTCCTGAGGAAAAGGAGAAATATAAGTTGGGAGATCCGAGATCATTTCATTACCTCAATCAATCCAGTTGCTATGAATTAGCTGGTGTTAATGCTGCTCAAGAGTATCTTAGCACTAAAAGAGCCATGGATATTGTGGGAATCAGTCAGGAGGAGCAGGATGCAATTTTCAGAGTTATTGCTGCTATTCTCCATCTTGGAAACATTAGATTTGAAAAATCAGAAGAAATGGATTCATCAGTTCTAGCAGATGAAGACTCCAAGTTCCATCTCGAAACAACCGCAGAACTTCTAATGTGTCATCCTAATGCTGTGGAAGTTGCCCTATGTAAGCGTGTGATGATCACCCCCGAAGAAATCATCGAAAGAAGTCTTGACCCTGTTGCCGCAACAGTTAGTAGGGATGGTTTGGCGAAGACATTATATTCTCGTTTGTTTGACTGGTTAGTCCAGAAAATTAATATCTCCATTGGGCAGGATAGTAACTCAAAATGTCTCATTGGTGTTCTTGACATATATGGCTTTGAAAGCTTTCAAACTAATAGTTTTGAGCAGTTTTGTATTAATTTTACGAATGAAAAGCTGCAGCAGCACTTCAACCAGCACGTGTTTAAGATGGAGCAAGAGGAATACACAAAAGAAGGCATTGATTGGAGCTACTTAGAATTTGTAGATAATCAAGATGTACTTGATCTCATTGAAAAGAAACCAGGTGGAATAATTGCTCTGCTTGATGAGGCTTGCATGTTTCCCAAGTCAACTCATGAAACGTTTTCAACAAAGCTTTATCAGACATTCAAAGTTCACAAACGCTTCATCAAGCCAAAATTGGCACGCTCAGACTTCACTGTTGTTCATTATGCAGGGGAGGTCCAGTATCAATCTGAGCATTTCATAGACAAAAACAAAGACTATGTTGTTCCAGAACATCAAGACATGCTAAGTACTTCCAAATGTTCATTTGTATCAGGCCTTTTTCCTCCACTTTCTGAGGAGACAGCAAAATCTGCTAAATTTTCTTCTATTGGCTCTCGTTTTAAGCTACAATTACAACATTTGATGGAAGCGCTCAATCTGACAGAGCCCCACTATATTAGATGTGTGAAGCCGAATAATCAATTAAAACCTGGGATATTTGAGAATATGAACGTCATGCATCAATTACGTTCTGGTGGTGTTCTTGAAGCAGTGAGAATAAAATGTGCTGGATTCCCCACTCACAGGACCTTTCATGAATTTTTAACTCGACTAGGCATTCTTGCTCCAGAGATTCTTCGAGGGAGCTTCGAAGAAAAGGAATCGTGTAAAATGATTTTAGAGAAGGTTGGGCTGACAGGTTATCAGATAGGGAAAACAAAAATATTCCTAAGAGCTGGTCATATGGCAGAATTGGATGCTCGTAGAGCTTACATGCTTAGCAACTCTGCAACAATTATCCAAAAGCAGACTAAAACTTATTTTAGTCGGAAAACATATATTAAACTGCGAAAGTCCTCTATTTTTGTGCAGTCTATTTGCAGAGGAGAACTGGCACGGAGACAATATTATCACATGAAGAGGAAAGCAGCTGCCATCAAAATTCAAACCTATACACGTGGAAGATTAGCCAGAAAATGCTACTTCGAAATAAGGATTTCTGTCATTGTCTTACAAACAGGTATTCGGGCTATGGCTGCTCGACATGCTCGTGATAAATTGAGACATATAAAGCAAAATAGGGCATCAACTATTATTCAGTCCTATTGGCGGCGACATAAAGCTCTCTTGGACTATCAGAACCTTAAGAAAGCGTCAATCATTTCACAAAGTTTCGATCACTCCAGCGATGAACATGAACAGAAGGTTATGGAGATATCAGTTGAAAATGAAAGTCCTTCCATGGAAGAATCTTCAAATTTACTCCACGAAGAATCCTCAAGTTCTTTCCAAGATGATGAAAGGATTGAAGCTATTAGGGATTTCTCTAGTCCCATCATAGAAACTGAAAGCAATGAAGCTATTAGGGATTTCTCTAGTCCCCTCAGAGACACTGAAAGCGATGAAGCTATTAGGGATTTCTCTAGTCACCTCGGAGACACTGAAAAGATTGAGGCTCTTTCTGCAGAAATAAAAACTTTAAAGGTCATGCTGCAGGAAGAAAAACAAAAAACTGATGAATATGAAAGGAAATATGTAGAAGCTCAAGGATCTAGCGAAGAGTTACGCAAAAAGTTAGCTGAAACCGAAAAAAGAGTATATCAGCTTCAGGACTCATTGAACAGGATGATATCTTCCATGTCAAGTCAAGTTGCCGAGCTGAAGACAATCTTAAGTACTTCATCAAGATTGAGTTCAACTTTTCGACCTATTGCTAGAGTTGACGTTGCTTCCAGTAACTCTGATACTTCATCTACAGACTCTGATTTCACATTTCCAGCACCCGTTACAAATCCAGAAGCATTATCTTCTACCCAACTAGTAGTTCAGGATATCACTGCAGCTGAAGGATCAGGATCTGAAAGTGAAAAAGAAGCCTCTGGGGAAACAATGAAGAAAGTCCGAGAAAAGGATGGAGGTTGCATTGGCTAG 3357 0.395 MGMPENIIVGSHVWVGDPELVWIDGVVLSINGEEAEIQTSNEKKVVSRLSKLHPKDTDAPTDGVDDMTKLAYLHEPGVLYNLENRYKINEIYTYTGNILIAINPFQSLPHLYDANAMKRYKGERIGNLSPHVFAIAEAAYRAMITEEKSNSILVSGESGAGKTETTKMLMLYLAYLGGHTASEGRTVEQQVLESNPVLEAFGNAKTVRNDNSSRFGKFVEIQFDKYGRISGAAIRTYLLEKSRVCQISDPERNYHCFYLLCASPPEEKEKYKLGDPRSFHYLNQSSCYELAGVNAAQEYLSTKRAMDIVGISQEEQDAIFRVIAAILHLGNIRFEKSEEMDSSVLADEDSKFHLETTAELLMCHPNAVEVALCKRVMITPEEIIERSLDPVAATVSRDGLAKTLYSRLFDWLVQKINISIGQDSNSKCLIGVLDIYGFESFQTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEGIDWSYLEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSTKLYQTFKVHKRFIKPKLARSDFTVVHYAGEVQYQSEHFIDKNKDYVVPEHQDMLSTSKCSFVSGLFPPLSEETAKSAKFSSIGSRFKLQLQHLMEALNLTEPHYIRCVKPNNQLKPGIFENMNVMHQLRSGGVLEAVRIKCAGFPTHRTFHEFLTRLGILAPEILRGSFEEKESCKMILEKVGLTGYQIGKTKIFLRAGHMAELDARRAYMLSNSATIIQKQTKTYFSRKTYIKLRKSSIFVQSICRGELARRQYYHMKRKAAAIKIQTYTRGRLARKCYFEIRISVIVLQTGIRAMAARHARDKLRHIKQNRASTIIQSYWRRHKALLDYQNLKKASIISQSFDHSSDEHEQKVMEISVENESPSMEESSNLLHEESSSSFQDDERIEAIRDFSSPIIETESNEAIRDFSSPLRDTESDEAIRDFSSHLGDTEKIEALSAEIKTLKVMLQEEKQKTDEYERKYVEAQGSSEELRKKLAETEKRVYQLQDSLNRMISSMSSQVAELKTILSTSSRLSSTFRPIARVDVASSNSDTSSTDSDFTFPAPVTNPEALSSTQLVVQDITAAEGSGSESEKEASGETMKKVREKDGGCIG* 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2458 1118 Gene3D Kinesin motor domain 65 662 IPR036961 -
Mal1g2458 1118 Pfam Myosin N-terminal SH3-like domain 9 46 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mal1g2458 1118 CDD MYSc_Myo11 76 720 IPR036018 -
Mal1g2458 1118 ProSiteProfiles IQ motif profile. 834 861 IPR000048 GO:0005515
Mal1g2458 1118 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Mal1g2458 1118 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mal1g2458 1118 MobiDBLite consensus disorder prediction 884 901 - -
Mal1g2458 1118 PANTHER MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN 6 1050 - -
Mal1g2458 1118 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal1g2458 1118 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal1g2458 1118 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal1g2458 1118 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal1g2458 1118 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal1g2458 1118 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal1g2458 1118 Gene3D - 734 784 - -
Mal1g2458 1118 Gene3D - 785 838 - -
Mal1g2458 1118 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 785 IPR027417 -
Mal1g2458 1118 SMART MYSc_2a 56 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal1g2458 1118 Gene3D - 939 1047 - -
Mal1g2458 1118 Gene3D - 252 310 - -
Mal1g2458 1118 Gene3D - 439 623 - -
Mal1g2458 1118 Coils Coil 959 1014 - -
Mal1g2458 1118 Pfam IQ calmodulin-binding motif 785 803 IPR000048 GO:0005515
Mal1g2458 1118 Pfam IQ calmodulin-binding motif 836 851 IPR000048 GO:0005515
Mal1g2458 1118 Pfam IQ calmodulin-binding motif 759 778 IPR000048 GO:0005515
Mal1g2458 1118 MobiDBLite consensus disorder prediction 884 905 - -
Mal1g2458 1118 MobiDBLite consensus disorder prediction 1097 1118 - -
Mal1g2458 1118 Gene3D - 666 733 - -
Mal1g2458 1118 MobiDBLite consensus disorder prediction 1052 1092 - -
Mal1g2458 1118 PANTHER MYOSIN 6 1050 - -
Mal1g2458 1118 SMART iq_5 734 756 IPR000048 GO:0005515
Mal1g2458 1118 SMART iq_5 805 827 IPR000048 GO:0005515
Mal1g2458 1118 SMART iq_5 757 779 IPR000048 GO:0005515
Mal1g2458 1118 SMART iq_5 782 804 IPR000048 GO:0005515
Mal1g2458 1118 SMART iq_5 833 855 IPR000048 GO:0005515
Mal1g2458 1118 ProSiteProfiles IQ motif profile. 783 810 IPR000048 GO:0005515
Mal1g2458 1118 MobiDBLite consensus disorder prediction 1052 1118 - -
Mal1g2458 1118 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 865 IPR027417 -
Mal1g2458 1118 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Mal1g2458 1118 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2458 Mal-Chr1 33648161 33665828 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2458 1 1018 Myosins gene family AT1G54560 63.349 0.0 1393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2458 K10357 - gmx:100803485 1764.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2458 1 33648161 33665828 Mal1g2458 1 33648161 33665828 ECH