Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2443 ATGCATCCATATCTTTTGCCCAAAAACTCTTCTCTTCATTTCTTAGGCATCAAAATTGACCTCAATTTTGTTCGCATGGCAATGGCAGAGGTGGTGGGTACTTTTATATTGATGTTTTGTGTATGTGGAATCATTGCAAGCACACAACACCAAAATGGTGCAGCTGGCCTTCTGGAGTATGCAGCTACAGCAGGATTAACAGTGGTTGTGATAATTTTCTCTATAGGTCCAATTTCTTTTGCACATGTTAACCCAGCTATCACAATAGCCTTTGCAACAATTGGTCAATTTCCATGGTTCAAGGTTCCAATTTACATATTAGCACAAACAATTGGTTCTTTGATGGCAACATATATTGGTAGCCTTGTCTATGGTATAAAATCAGAGGTTATGATGACTCAACCACTTCAAGGGTGTAACTCTGCCTTCTGGGTGGAGGTTATTGCAACATTCATCATCATGTTTTTGGTTACAGCTTTGACATCTGAACCTCAATCAGTGGGACATTTATCTGGTTTTGTTGCTGGAGTTGCAATTGGACTTGGTGTACTAATTACAGGCCCTGTTTCAGGTGGATCAATGAATCCAGCAAGATCACTTGGTCCAGCAATTGTGTCATGGAAATTTAAGGACCTTTGGATATACATCCTAGCCCCAAGTGGAGGGGCTGTGGCAGGAGCTCTACTGTTTCGTTTCCTACGTCTTAAAGACCAACATTGCATCTCTCCAAACATGAGTGAAGTTGGTCATCCCATACCCTTTTGTGCAAGGAGAAGTGGGCCCATGATTTTGCTGGTAAAGAAAAATTGGAGTTTATTGTGTGACAAAGTAGAAGGGTTCATACAAAGATATGTTTTAAGAACAGAAGCAATATCTGATGGTGTTTATCATAAGTTGTCATTGTAA 906 0.4018 MHPYLLPKNSSLHFLGIKIDLNFVRMAMAEVVGTFILMFCVCGIIASTQHQNGAAGLLEYAATAGLTVVVIIFSIGPISFAHVNPAITIAFATIGQFPWFKVPIYILAQTIGSLMATYIGSLVYGIKSEVMMTQPLQGCNSAFWVEVIATFIIMFLVTALTSEPQSVGHLSGFVAGVAIGLGVLITGPVSGGSMNPARSLGPAIVSWKFKDLWIYILAPSGGAVAGALLFRFLRLKDQHCISPNMSEVGHPIPFCARRSGPMILLVKKNWSLLCDKVEGFIQRYVLRTEAISDGVYHKLSL* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2443 301 PANTHER AQUAPORIN NIP2-1 7 246 IPR034294 -
Mal1g2443 301 SUPERFAMILY Aquaporin-like 21 238 IPR023271 -
Mal1g2443 301 Gene3D Glycerol uptake facilitator protein. 10 247 IPR023271 -
Mal1g2443 301 PRINTS Major intrinsic protein family signature 145 163 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal1g2443 301 PRINTS Major intrinsic protein family signature 25 44 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal1g2443 301 PRINTS Major intrinsic protein family signature 213 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal1g2443 301 PRINTS Major intrinsic protein family signature 64 88 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal1g2443 301 PRINTS Major intrinsic protein family signature 101 120 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal1g2443 301 PRINTS Major intrinsic protein family signature 176 198 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal1g2443 301 PANTHER AQUAPORIN NIP7-1-RELATED 7 246 - -
Mal1g2443 301 ProSitePatterns MIP family signature. 82 90 IPR022357 -
Mal1g2443 301 Pfam Major intrinsic protein 21 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2443 Mal-Chr1 33213579 33216496 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2443 20 244 Major Intrinsic Protein MIP AT4G10380 41.778 3.68e-53 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2443 K09874 - mtr:MTR_1g070385 474.552