Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2439 ATGGCAACCAAAGCTTCCAAACCTTCTCATCCTACTTATGAAGAGATGATTAAGGATGCAATTGTGACACTGAAGGAGAGGACAGGTTCAAGCCAATTCGCAATTGCGAAATTCATCGAAGAGAAACACAAACAACTTCCTTCAAATTTCAAGAAGTTATTGCTTCACAATTTGAAGAAGAATGTTGCTTCTGGAAAGCTTGTTAAGGTTAAAGGCTCATTCAAGCTTTCTCCGGTGACGAAATCATCGACGGAGAAAAAGCCTGCAGTCGCCAAGCCTAAGGCAAAGACAACTGCTAAGGTGACAGCAGTGAAGGCCAAGCCCGCTGCTAAGCCAAAGGTTGCTTCAAAGGCCAAATCTGTTACGGCGAAGCCCAAAGCTGCTGCTGCTAAGCCCAAGGCTGCTGCTACCAAGCCCAAAGCTGCTGCTGCCAAACCCAAAGCTGCTGCAAAGGCCAAACCTGCCGCTAAGCCCAAGGCAGCTGTGAAACCGGTGAAGGCTGCAAGGACTTCGACGAGGACAACACCGGGGAAGAAAGTTGTGGCTGCTAAGAAGCCAGTAGTGAAGAAAGCTGTGGTTGCTAAGAAAGCTCCGGTGAAGAAAGCAGTGGCTGCTAAGAAGTCTCCGGTGAAGAAAGTTGTTTCGACGAAGAGAGGGGGAAGAAAATGA 669 0.4813 MATKASKPSHPTYEEMIKDAIVTLKERTGSSQFAIAKFIEEKHKQLPSNFKKLLLHNLKKNVASGKLVKVKGSFKLSPVTKSSTEKKPAVAKPKAKTTAKVTAVKAKPAAKPKVASKAKSVTAKPKAAAAKPKAAATKPKAAAAKPKAAAKAKPAAKPKAAVKPVKAARTSTRTTPGKKVVAAKKPVVKKAVVAKKAPVKKAVAAKKSPVKKVVSTKRGGRK* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2439 222 CDD H15 7 96 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mal1g2439 222 SUPERFAMILY "Winged helix" DNA-binding domain 6 87 IPR036390 -
Mal1g2439 222 PANTHER HISTONE H1 4 222 - -
Mal1g2439 222 Gene3D - 4 95 IPR036388 -
Mal1g2439 222 PRINTS Histone H5 signature 23 40 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mal1g2439 222 PRINTS Histone H5 signature 156 175 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mal1g2439 222 PRINTS Histone H5 signature 101 115 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mal1g2439 222 PRINTS Histone H5 signature 134 151 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mal1g2439 222 SMART h15plus2 7 73 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mal1g2439 222 MobiDBLite consensus disorder prediction 102 182 - -
Mal1g2439 222 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 9 78 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mal1g2439 222 PANTHER HISTONE H1.1 4 222 - -
Mal1g2439 222 Pfam linker histone H1 and H5 family 10 77 IPR005818 GO:0000786|GO:0003677|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2439 Mal-Chr1 33194535 33195289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2439 11 98 Single Myb Histone (SMH) Gene Family AT1G17520 35.227 3.81e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2439 K11275 - zju:107425932 121.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2439 1 33194535 33195289 Mal1g2439 1 33194535 33195289 ECH