Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2415 ATGGAAAATTCATTGGGGAGCCATGAAACAGAGATGAATCTCAAGGCTACAGAATTAAGGTTGGGATTACCCGGTTGTGATGAAGTGGAGAAACTTCCATGCAATTTCTCTATTCTTAGAAACAACAAGAGATCTTCACCTGAAACAAGTGATGTAGAGTCCATGAGCAACATCAAATTGAATACTTCTAATGGCTCTTCTTTTACCACAAATGATGAGCAAGATAATGCTCCACCTTCAAAGGCACAAGTAGTGGGATGGCCACCAATTAGATCTTATAGGAAGAATAGTTTGCAACAAAAGAAGGGTGAAGAGGTTGGGATGTACTTGAAAGTGAGTATGGCTGGTGCACCTTATTTAAGAAAGATAGATCTCAAAGTTTACAAGAGTTACTCAGAACTTCTCAAGGTTTTGGAAAATATGTTCAAGTGTACAATTGGTGAATATTCAGAAAGAGAAGGTTACAATGGATCTGAATTTGTTCCAACTTATGAAGACAAAGATGGTGATTGGATGCTTGTTGGAGATGTTCCTTGGGAAATGTTCATGTCTTCTTGCAAGAGATTGAGAATTATGAAAGGATCTGAAGCAAAGGGATTGGGTTGTTTTTGA 612 0.3791 MENSLGSHETEMNLKATELRLGLPGCDEVEKLPCNFSILRNNKRSSPETSDVESMSNIKLNTSNGSSFTTNDEQDNAPPSKAQVVGWPPIRSYRKNSLQQKKGEEVGMYLKVSMAGAPYLRKIDLKVYKSYSELLKVLENMFKCTIGEYSEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMKGSEAKGLGCF* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2415 203 Pfam AUX/IAA family 17 201 IPR033389 -
Mal1g2415 203 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 6 201 IPR003311 GO:0005634|GO:0006355
Mal1g2415 203 MobiDBLite consensus disorder prediction 40 78 - -
Mal1g2415 203 Gene3D - 101 203 - -
Mal1g2415 203 PANTHER AUXIN-INDUCED PROTEIN 6 201 - -
Mal1g2415 203 SUPERFAMILY CAD & PB1 domains 104 193 - -
Mal1g2415 203 ProSiteProfiles PB1 domain profile. 107 194 IPR000270 GO:0005515
Mal1g2415 203 MobiDBLite consensus disorder prediction 40 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2415 Mal-Chr1 32560977 32562016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2415 99 200 B3 DNA Binding Superfamily AT2G46530 36.275 4.93e-12 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mal1g2415 AUX_IAA 6.3e-56 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2415 K14484 - gmx:100780752 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2415 1 32560977 32562016 Mal1g1125 1 14029042 14030006 ECH
Mal1g2415 1 32560977 32562016 Mal1g2415 1 32560977 32562016 ECH
Mal3g3801 3 115673998 115674826 Mal1g2415 1 32560977 32562016 PCT