Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2413 ATGTCGAATCATCCTTCCGATACACCCGCGGACGATTTCCTTGAACAAATTCTCGGCCTCCCGAATTTCACCTCCGCCGATGGAACCGACGCTTCTCCGATGATGCTTCAGCTCAACTCCGGCGACGCCGCCACTCACCTTGCCGCCGGAGCGGGTTTTCATGCTCCGGTTTATCATTTGGGCTTGAGCTTGGACCAGGGTAAAGGAGGAGGATTCTTGAAGCCTGATGATGCTTCTGGAAGTGGGAAGCGTTTCCGGGAAGATGTTGTTGATACAAGACCTAAGAATACTTTTCATGGGCAACCCATGCCTACTACAGTTCCAGCTGCTCCACATCCACCAGCAATGCGTCCTAGAGTACGTGCAAGAAGAGGACAGGCTACAGATCCACACAGCATCGCTGAAAGGTTGCGCAGAGAAAGAATAGCTGAAAGAATCAGGGCTTTGCAAGAACTTGTTCCTAGTGTCAACAAGACTGATCGAGCTGTCATGCTGGATGAAATTGTGGATTATGTCAAATTCTTAAGGCTTCAAGTGAAGGTTTTGAGCATGAGTAGATTGGGTGGAGCCGGTGCAGTGGCTCCACTGGTAACTGACATCCCATTATCGTCAGTCGAGGAAGAAGGAAGTGAGAGTGGGAGAAACCAACCAGCTTGGGAGAAGTGGTCTAATGATGGCACAGAAAAGCAAGTAGCTAAGCTTATGGAAGAAAATGTCGGGGCTGCAATGCAGTTTCTTCAATCAAAGGCACTCTGCATCATGCCCATCTCACTTGCATCCGCAATATACCAATCGCAACCATCAGACAACTCCAGTATAATTAAGCCTGAAACTACTCCTCCTCCATAG 849 0.49 MSNHPSDTPADDFLEQILGLPNFTSADGTDASPMMLQLNSGDAATHLAAGAGFHAPVYHLGLSLDQGKGGGFLKPDDASGSGKRFREDVVDTRPKNTFHGQPMPTTVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAVMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSESGRNQPAWEKWSNDGTEKQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPSDNSSIIKPETTPPP* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2413 282 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 124 185 IPR036638 GO:0046983
Mal1g2413 282 MobiDBLite consensus disorder prediction 72 130 - -
Mal1g2413 282 Pfam Helix-loop-helix DNA-binding domain 131 175 IPR011598 GO:0046983
Mal1g2413 282 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 7 271 - -
Mal1g2413 282 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 126 175 IPR011598 GO:0046983
Mal1g2413 282 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 271 - -
Mal1g2413 282 MobiDBLite consensus disorder prediction 79 94 - -
Mal1g2413 282 SMART finulus 132 181 IPR011598 GO:0046983
Mal1g2413 282 Gene3D - 121 183 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2413 Mal-Chr1 32534925 32538187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2413 53 281 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 78.298 4.19e-117 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal1g2413 HLH 2.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2413 - - gmx:100793177 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2413 1 32534925 32538187 Mal1g1339 1 17255132 17259553 ECH
Mal1g2413 1 32534925 32538187 Mal1g2413 1 32534925 32538187 ECH