Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2405 ATGGGTCAAATCCAGTACTCTGAGAAGTATTTCGATGACACTTATGAGTACATGCATGTTGTTCTTCCTCTGGAAGTGGCGAAATTGCTACCCAAGAATCGGCTTCTCTCTGAAAATGAGTGGCGTGCAATAGGACCACACATTATGCTTTTCAGGAGGCCATTGAATTATCAGCAGCAGCAGGACAACCAGGCCCACCAGAGCATGCTTGTCAAATGA 219 0.4566 MGQIQYSEKYFDDTYEYMHVVLPLEVAKLLPKNRLLSENEWRAIGPHIMLFRRPLNYQQQQDNQAHQSMLVK* 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2405 72 SMART CKS_2 3 56 IPR000789 GO:0016538
Mal1g2405 72 Pfam Cyclin-dependent kinase regulatory subunit 4 45 IPR000789 GO:0016538
Mal1g2405 72 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Mal1g2405 72 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Mal1g2405 72 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 46 68 - -
Mal1g2405 72 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 1 45 - -
Mal1g2405 72 Gene3D - 1 46 IPR036858 GO:0016538
Mal1g2405 72 SUPERFAMILY Cell cycle regulatory proteins 1 63 IPR036858 GO:0016538
Mal1g2405 72 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 46 68 - -
Mal1g2405 72 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2405 Mal-Chr1 32366481 32366746 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2405 1 72 Core Cell Cycle Gene Families AT2G27970 63.636 3.67e-33 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2405 K02219 - gmx:547737 115.931