Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal1g2391 | ATGTTCCCTGCACTTATGTCCAATTCCACTTCTTTCTCAGAAGAAACAGGTGTCTCTTCTAGTAGATTAAACCACGTTGTTTCAACCATTAACTCTCCACAACAGCCTCAAAAGACCAAGAAAAAAAGAAACCTCCCTGGTAACCCAGATCCTGATGCTGAAGTGATAGCTTTATCACCAAAGACACTATTAGCTACAAATAGATTTGTGTGTGAGATCTGCAACAAAGGTTTTCAAAGAGATCAAAACCTACAGCTACATAGGAGAGGACATAACCTACCATGGAAGTTGAAGCAAAGGAACAACAAAGAGGTTATTAAAAAGAGAGCTTATGTTTGTCCTGAGCCATCTTGTGTTCACCATAACCCTTCAAGGGCTCTTGGAGATCTTACAGGAATTAAGAAACATTATAGTAGAAAACATGGTGAGAAGAAGTGGAAATGTGATAAATGCTCAAAGATCTATGCTGTTCATTCTGATTGGAAAGCTCACTCTAAAACTTGTGGTACTAGAGAATATAAATGTGATTGTGGTACCCTTTTTTCCAGGAAGGATAGCTTCATAACCCACAGAGCATTTTGTGATGCATTGGCTGAAGAAAGTGCAAGAATGTCAGCAAACCAATTAGCCATCACCACCACAAACACAAACCCATTAGTCCAATCTCTCTTCCTCTTCCCAAATCAACAACAAAATTTCACAAACCAACAAAGCCACATCACTTGGGACCCACCTCACCAAAACCCTAACCCTAACAACCTCAACAACACTCTTACCAATCCCCACCACCACCACAACATCAAACCTGAATCTCAAAACTTTCACAACAACCTCTCTTCTCCTCCTCTTCCATTTCTTCATCACACAAACCCTAATTCTGCCACGTCACCACACCTCTCAGCAACTGCACTTCTCCAGAAAGCAGCTACCGTCGGTGCCGCCGCCATCACAGGCAGCAGCCAACCACAAATGACTCATCTCAGCATGGGAGAGTTTGGATCAGTACCTGATCACCATCACTACATGAGAGGGCTCACCGGAAAGAAGGACGACGGTCTCACGAGAGACTTTCTCGGCCTTACCAACGGCGGAGGAAATGGTGGTGGATCAGTTGACGTAAAAGATATGCTAACATTCACAGGGGGTGTAGAGTACCACCAACAACAACATCAAAACATGATGTTCAAGACACAGTCACAACAAGGTTTTGGTTTTCTTGGGACAACAACTGTTCCTGAATCGTGGGGGAATTGTTAA | 1257 | 0.4304 | MFPALMSNSTSFSEETGVSSSRLNHVVSTINSPQQPQKTKKKRNLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRNNKEVIKKRAYVCPEPSCVHHNPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKIYAVHSDWKAHSKTCGTREYKCDCGTLFSRKDSFITHRAFCDALAEESARMSANQLAITTTNTNPLVQSLFLFPNQQQNFTNQQSHITWDPPHQNPNPNNLNNTLTNPHHHHNIKPESQNFHNNLSSPPLPFLHHTNPNSATSPHLSATALLQKAATVGAAAITGSSQPQMTHLSMGEFGSVPDHHHYMRGLTGKKDDGLTRDFLGLTNGGGNGGGSVDVKDMLTFTGGVEYHQQQHQNMMFKTQSQQGFGFLGTTTVPESWGNC* | 419 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal1g2391 | 418 | MobiDBLite | consensus disorder prediction | 238 | 262 | - | - | |
Mal1g2391 | 418 | Gene3D | Classic Zinc Finger | 48 | 118 | - | - | |
Mal1g2391 | 418 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 71 | 91 | IPR013087 | - | |
Mal1g2391 | 418 | MobiDBLite | consensus disorder prediction | 28 | 52 | - | - | |
Mal1g2391 | 418 | PANTHER | SERINE/THREONINE-PROTEIN KINASE RIO | 7 | 396 | - | - | |
Mal1g2391 | 418 | PANTHER | PROTEIN INDETERMINATE-DOMAIN 12 | 7 | 396 | - | - | |
Mal1g2391 | 418 | SMART | c2h2final6 | 111 | 141 | IPR013087 | - | |
Mal1g2391 | 418 | SMART | c2h2final6 | 146 | 166 | IPR013087 | - | |
Mal1g2391 | 418 | SMART | c2h2final6 | 69 | 91 | IPR013087 | - | |
Mal1g2391 | 418 | MobiDBLite | consensus disorder prediction | 28 | 42 | - | - | |
Mal1g2391 | 418 | SUPERFAMILY | beta-beta-alpha zinc fingers | 68 | 166 | IPR036236 | - | |
Mal1g2391 | 418 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 69 | 91 | IPR013087 | - | |
Mal1g2391 | 418 | MobiDBLite | consensus disorder prediction | 271 | 297 | - | - | |
Mal1g2391 | 418 | Gene3D | Classic Zinc Finger | 123 | 204 | - | - | |
Mal1g2391 | 418 | MobiDBLite | consensus disorder prediction | 238 | 297 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal1g2391 | Mal-Chr1 | 32105650 | 32110016 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal1g2391 | 21 | 403 | IDZ Gene Family | AT4G02670 | 49.392 | 2.44e-121 | 357 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Mal1g2391 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal1g2391 | K25870 | - | gmx:100812496 | 545.428 |