Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2388 ATGAATTATATGTACTCAGTGAAAGAAGAATACTTGGAACCAACGATTCCACCACCCCAACCAATTGAAGGACTTCATGAAACTAGACCCCAACCATTCCTCACCAAAACATTTGATGTGGTGGATGACCAAAGTACCAACAACATAGTTTCATGGAACAGAAGTGGCACCAGCTTTGTGGTTTGGGATACACATGCCTTCTCCAATCATCTCCTTCCAAGATACTTCAAACACAATAATTTCTCAAGTTTTGTAAGACAACTAAACACTTACGGGTTTAGAAAAATTGATCCAAATAGATGGGAATTTGCAAATGAAGGATTCCTAAGAGGGCAAAGACATCTATTGAGGAACATAAGGAGAAATAAGGGACCTTCTCAGCCTATTGAAGTTGGCCATTTTAGACTAGAAGCAGAAATCGATCGTTTAAGACAAGAGAAACAAGCATTGATGATGGAGCTTGTGAGTCTTAGACAGCAGCAATATAATACCACACTGTATTTACTAGAGATGGAGCAAAGGTTACAAGGGATAGAAATCAAGCAAAAACAAATGATGTCATTCTTAGCTAGAGCTATGAAAAACCCTGCCTTTATACACCAACTACTCCAACAAAAAGAGAAGAAAAAGGAGCTTGAAGAAGCCGTGACTATGACCAAAAAGAGAAGGCTTGTTGAACAAGGAACTAGACAAGGTATTGAACAATCAAGCAGTGGGGGTGAAGAAAGAAGAAGTGTTAAAGTTGAGCCTTTAGAATTAAGAGATTATTATGAATTCGGGGTCTCGGAATTGGAAATGCTGGCTATGGAAATGCAGGTTTTTGGAAGGGGGAAAATGGATAAGGAGGAAGTACCTGAGGCACTAGTATCACAAGAGAGGATCGAAAGAGTACTTGGTGATGAAGGGTTCTGGGAAGAACTAATGTTTAGTATGAAATCTGAGGTTAGATTTAACATTCCAACTTCTGAAGATAATGATGGGAATGAAGATGATTCAAGTGAACCACTGAGTCTGAATCAAGAATTTATCGGGATTAACTCTTTTCATTCAGTTCACTAG 1059 0.3872 MNYMYSVKEEYLEPTIPPPQPIEGLHETRPQPFLTKTFDVVDDQSTNNIVSWNRSGTSFVVWDTHAFSNHLLPRYFKHNNFSSFVRQLNTYGFRKIDPNRWEFANEGFLRGQRHLLRNIRRNKGPSQPIEVGHFRLEAEIDRLRQEKQALMMELVSLRQQQYNTTLYLLEMEQRLQGIEIKQKQMMSFLARAMKNPAFIHQLLQQKEKKKELEEAVTMTKKRRLVEQGTRQGIEQSSSGGEERRSVKVEPLELRDYYEFGVSELEMLAMEMQVFGRGKMDKEEVPEALVSQERIERVLGDEGFWEELMFSMKSEVRFNIPTSEDNDGNEDDSSEPLSLNQEFIGINSFHSVH* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2388 352 Pfam HSF-type DNA-binding 33 122 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal1g2388 352 Gene3D - 25 123 IPR036388 -
Mal1g2388 352 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 18 322 IPR027725 -
Mal1g2388 352 Coils Coil 133 160 - -
Mal1g2388 352 Coils Coil 202 222 - -
Mal1g2388 352 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-7A 18 322 - -
Mal1g2388 352 PRINTS Heat shock factor (HSF) domain signature 33 56 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal1g2388 352 PRINTS Heat shock factor (HSF) domain signature 84 96 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal1g2388 352 PRINTS Heat shock factor (HSF) domain signature 71 83 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal1g2388 352 SMART hsfneu3 29 122 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal1g2388 352 SUPERFAMILY "Winged helix" DNA-binding domain 30 121 IPR036390 -
Mal1g2388 352 MobiDBLite consensus disorder prediction 319 338 - -
Mal1g2388 352 MobiDBLite consensus disorder prediction 225 245 - -
Mal1g2388 352 ProSitePatterns HSF-type DNA-binding domain signature. 72 96 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2388 Mal-Chr1 32057494 32058674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2388 15 308 HSF AT3G22830 49.550 9.94e-102 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mal1g2388 HSF_DNA-bind 4.4e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2388 K09419 - gmx:100794264 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3788 3 115476532 115478712 Mal1g2388 1 32057494 32058674 PCT