LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal1g2381	ATGGGAAACGTAGATTATGATGGTTACCCTAGTTCGGGCATGAACGTTGATGAGAGTGTGCATGGTGTTGCAATTCCACCTCCTCAAACATTTTTTAAGTCTATGAAGTATTCAATGAAAGAGACTTTCTTCCCAGATGATCCATTGAGGAGGTTTAAGAATCAACCAGCTTCTAAAAAGTTGGTGCTTGGTCTTCAATATTTCTTCCCTATATTTGAATGGGCACCAAGCTACACTTTTCAGTTCTTGAAATCTGATCTCATAGCTGGCATCACTATTGCTAGCTTGGCTATTCCTCAAGGCATTAGTTATGCCAAACTCGCCAACCTACCACCAATTCTTGGACTATATTCAAGCTTTATACCACCGTTGATTTATGCAATGATGGGTAGTTCAAGGGATTTGGCAGTTGGAACTGTGGCAGTTGGATCTCTTTTGATGGGTTCCATGTTGTCCAATGAGGTTAACCCCAACGAAAATCCAAAGCTTTTTCTCCACCTTGCTTTCACAGCTACATTCTTTGCTGGGGTTTTGCAAGCTTCATTGGGTCTCTTTAGGTTAGGGTTTATCGTGGATTTCTTGTCACATGCAGCCATAGTAGGGTTCATGGGAGGAGCAGCCACAGTGGTTTGTCTACAGCAGCTGAAATCGATTCTAGGGCTTGAACATTTTACCCATGCTGCTGATATTGTATCAGTCATGCGGTCTGTTTTTACCCAAACTCATCAGTGGAGGTGGGAAAGTGCAGTGTTGGGATTTTGCTTCATTTTCTTTCTCCTTGTTACAAGATACTTCAGCAAAAAACAACCCAAGTTCTTTTGGGTGTCAGCAATGACGCCGTTGGCGTCCGTTATACTTGGAAGTGTGCTGGTTTATTTCACTCATGCCGAGAACCACGGCGTTCAAGTGATAGGAGAATTGAAGAAAGGGTTAAATCCACCATCACTCACAGATTTGGTATTTGTGTCTCCATATATGACCACAGCTATCAAAACAGGCCTTATTGTTGGCATTATAGCTCTTGCGGAAGGAATAGCTGTGGGAAGAAGCTTTGCAATGTATAAAAATTACCATATTGATGGCAACAAAGAGATGATAGCTATTGGAACTATGAACATAGTTGGTTCTTTCACCTCTTGCTACCTCACAACAGGGCCATTTTCGCGTTCGGCCGTGAACTATAATGCTGGATGCAAGACAGCAGCATCCAACATTGTGATGTCAATTGCAGTCATGTTGACACTATTATTTTTGACACCTTTGTTCTATTACACTCCTCTGGTGGTACTATCAGCCATAATTGTATCTGCAATGCTTGGACTTATAGATTATGAAGCAGCCATCCATCTTTGGAAGATTGACAAATTTGATTTTGTCGTCTGCATTAGCGCATATATCGGCGTTGTCTTTGGCAGTGTTGAAATTGGCTTAGTCATAGCAGTTGCGATATCGGTACTTCGGATACTGCTATTTGTTGCAAGGCCAAGGACATTTGTTTTGGGAAACATTCCAAATTCTGTAATATACAGAAACATTGAGCATTATCCAAATGCAAATCGTATTTCCGGAATTCTAATTCTAAAGATTGATGCACCAATTTACTTTGCCAATGCTAGCTATTTAAGAGAAAGGATCTCAAGGTGGATTGATGAAGAAGAAGACATAATTAAAGATACAGGGGAGACAAGTTTGAAGTATGTTATAATGGATATGAGTGCTGTTGGAAATATTGATACAAGTGGAATAAGTATGCTTGAAGAGATTAAGAAGATGGCTGAAAGAAGAGAGCAACAACTTCTTTTGGTCAATCCTGGAAGTGAGGTGATGAAGAAACTAAACAAATCCAACTTCCAAAAGGATATAGGAGGAAATTGGATCTATCTGACAGTGGAAGATGCTGTTAGAGCATGTAACTTTGCAGGCAAAACAAATCCCAAAAGAGATGAATCTGAGGGTTGGAACAATGTCTGA	1971	0.4044	MGNVDYDGYPSSGMNVDESVHGVAIPPPQTFFKSMKYSMKETFFPDDPLRRFKNQPASKKLVLGLQYFFPIFEWAPSYTFQFLKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMGSMLSNEVNPNENPKLFLHLAFTATFFAGVLQASLGLFRLGFIVDFLSHAAIVGFMGGAATVVCLQQLKSILGLEHFTHAADIVSVMRSVFTQTHQWRWESAVLGFCFIFFLLVTRYFSKKQPKFFWVSAMTPLASVILGSVLVYFTHAENHGVQVIGELKKGLNPPSLTDLVFVSPYMTTAIKTGLIVGIIALAEGIAVGRSFAMYKNYHIDGNKEMIAIGTMNIVGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMSIAVMLTLLFLTPLFYYTPLVVLSAIIVSAMLGLIDYEAAIHLWKIDKFDFVVCISAYIGVVFGSVEIGLVIAVAISVLRILLFVARPRTFVLGNIPNSVIYRNIEHYPNANRISGILILKIDAPIYFANASYLRERISRWIDEEEDIIKDTGETSLKYVIMDMSAVGNIDTSGISMLEEIKKMAERREQQLLLVNPGSEVMKKLNKSNFQKDIGGNWIYLTVEDAVRACNFAGKTNPKRDESEGWNNV*	657

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Mal1g2381	656	Pfam	STAS domain	515	633	IPR002645	-
Mal1g2381	656	TIGRFAM	sulP: sulfate permease	70	633	IPR001902	GO:0015301\|GO:0016020\|GO:0055085
Mal1g2381	656	CDD	STAS_SulP_like_sulfate_transporter	515	630	-	-
Mal1g2381	656	Gene3D	STAS domain	494	640	IPR036513	-
Mal1g2381	656	Pfam	Sulfate permease family	83	463	IPR011547	GO:0016021
Mal1g2381	656	SUPERFAMILY	SpoIIaa-like	517	637	IPR036513	-
Mal1g2381	656	PANTHER	SULFATE TRANSPORTER	2	654	IPR001902	GO:0015301\|GO:0016020\|GO:0055085
Mal1g2381	656	ProSitePatterns	SLC26A transporters signature.	112	133	IPR018045	GO:0008271\|GO:0008272
Mal1g2381	656	ProSiteProfiles	STAS domain profile.	514	637	IPR002645	-
Mal1g2381	656	PANTHER	SLC26A/SULP TRANSPORTER-RELATED	2	654	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal1g2381	Mal-Chr1	31907764	31914352	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal1g2381	21	656	Inorganic Solute Cotransporters	AT4G02700	68.917	0.0	909

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal1g2381	K17471		-	gmx:100810196	1120.15

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal1g2381	1	31907764	31914352	Mal1g2381	1	31907764	31914352	ECH
	Mal3g3781	3	115318591	115326445	Mal1g2381	1	31907764	31914352	PCT

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