Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2356 ATGAGAGAAGGGTTGAGATCTCGGACTCCGGCAAGGAAGGGTTCTGGTGGTGGAGAAGTTGCTAGGAAGAAGAAAAGGGTTTTTGTGAAAAATGAGGATTTAGTTTCGGATGAGGGTTTAGTCTCGTCGACTGAGAAGAAGGGCGAAGTTGAGGCTTTAGTTTCGGGGGATGAGGTTTCTGGTGATGGAGGTGTTGTTCAAAAGAAAAGGGTTCGTGTGCAGAATGATGAGGGTTTGGTTTTGGGTGATGAGGGTTTAGTGGGACCTACCAAATCAATTGAGAAGGGAGAAGTTGATGCTTTAGTTTTGGGTGATGAGGGTTTAGTGAAACTTACCTCATCGATTGAGAAGAAGGGCGATGTTGAATGTGCAAGCGATGTTGAGTGTGCTGGTGAAGTTGAGGCTTTAGTGAAACCTACCTCATCGATTGAGAAGAAGGGCGGAGTTGAACGTGCAGGTGGTGTTGAGTGTGCTGGTGAAGTTGAGGCTTCAGTGAAACCTACGTCATCGATTGAGAAGAAAGGGGCAGTTGAATGTGCAGGCGATGTTGAGTGTGCTGGTGAAGTTGAATGTGCTGTGAGAAGAGGACGTGACTTGGATTTAAACGTGAGTTTGAGTGAAGAAGATGTTGACTTAGCTGAGAATGGCGACAGTAGCCCTATGAGTCGTTTAAAAGATGGGGATAGTAATGTAGAAGCTGAGGCTGATAAAAAGGAGAGTGAAGGGGTGAGTGGGGGTAGGAGTCGTTTAAAAGATGGGGATAGTAATGTGGAAGTTGAGGCTGATAAAAAGGAGATTGAAGGGGTGAGTGGGGGTCGATTGTTGCGGTCTAGGTCAAAGAAGGGGGGTGAGAGAATATCTTATAATGAAGGGAATGATGGTGTCTTTTCTGAGAGTGATGGTGAACACGGTGGGATGGAGAGGGTGCAAGTCAAAAAGGAGCCTGAAGAATTTGATGAGGTTTTAACTGATGGTAACAAGAATGAAAGGGTTAAGGTGAAGATGGGAGGGAACAGTAAGAAGAAATTGAAACGGAAGCGTGGGAGGCCTTTGAAAACAGAGATAAAAGAGAAAGATCAATTAGATGATCAGCCACCGCGTAAGGTTGGGAGGCCTCGCAAAACAGAGTTAAAAGAGGGTGAACAATCACCGCGTAAGCTTGGGAGGCCTCGCAAAACAGAGTTAAAAGAGGATGATCAGTCACCGCGTAAGCTTGGGAGGCCTCGCAAAACAGAGTTAAAAGAGGATGATAAGTTAGTTGATCAGTCACCGCGTAAACTTGGGAGGCCTCGCAAAACAGAGTTAAAAGAGGAAGATCAGTTCGTTGATCAGTCACCACGTAAACTTGGGAGGCCTCGCAAAACAGCGTTAAAAGTGGAAGATCAGTTAGTTGATCAGTCACCGCGTAAGCGTGGAAGACCCCTCATGACCGACCAACAAAAACATCTCACGACTGTGGCACATAATTGTACAGGAAAGGCGAGCCGTGAAGATGGTAAAAATGTTTTAATTGTAACAGATATTGCAAGTGAAAATGAAGTTGATGATACACTCTCAAGGAGATCCTCCGGTAAAAAGTTAAAAAAGAAGGGAGTTTCTCCTGTAAGGAAAAATAAATTGCGGAAGGTTTTGAAAACTGAGAATGATGGGATGGCCTCACCATTGGTATCAAATACTGTGAAAGCACCTGCTGCTGCTAAACAAGGGCAAAGGCGTAAAGAACAGCAGTTGGTGAGGGATAAAATAATGGAATGTCTCTCGGCTGCAGGATGGACTGTAGACCATAGACCTAGAAACGGCAGAAATTATATCGATGCAGTATATGTTGGTCTGGACGGAAGTACACATTGGTCTGTAACCTTGGCATACAAGAGGCTTAAAAAACATTATGAAGCCGGGGATGGTGAAGGTAAGTTGTATAAACCAGGATTCAAATTTACACCAATACCGGAGGAAGATTTCAATATACTAACTAGAGTAGTTACCAAGTCCAGGAAAGGAAGTAAGGTTAAATGTGTGCCATCTGGAGGAAAGGGTGGAAAGAGAGTTGATGGAGTCAAACGAAAAGAGAAAAAAATAAAACCTGGTTCTGGTGCAGGCAAGGGTAAGTCAGTGAAGGGGAAAATGAAAAGGAAACGATCACTTCATGAGGAGGACAACACAAATGTTACATCATCTAACAGGGATCGAAAGCGGCACAAAACACAGAACAAGATGCGAAGTACTCTGTTGGTTCGTGATGCTACAGAGGAGGTAGATTCAGAAATTAATGGATATGTGCCATACAATCGAAAACGAACTGTACTTGCCTGGATGATTGATTTGGGGACAATTCTCCAAAATGGGAAGGTCCGTTATACCCAAGATAGGTTGGAAAATGCTTCACTGGAAGGTAAGATCACAGGAGATGGCATTCACTGTGGCTGCTGTAATGAAATCATAACAATTTCAGACTTTGGAGTTCATGCAGGAAGCAAACAATCTGATCCTCTGAAAAATATATATACGGAGGAAGAAACTTCACTCCTACAATGCCTATTAGATTCATGGAATAAACAAGATGAATCTGAACTTAAAAGATTTCATTTCGTTGATGTTGCGGGCGAAGATCCAAATGATGATACATGTGGTGTCTGCGGAGACGGTGGAGACCTGATCTGCTGTGATGGTTGCCCATCGACATTCCATAAAAGCTGTTTGGATATAAAAAAGTTCCCATCTGGTGACTGGCACTGCGTTTACTGTTGTTGCAAATTTTGTGGGTTGGTTAGTGGAAGTTCAAACCGAAGTGTTGTCAATGATGAGTTTACTATGCCGGCATTGCTCACATGCCATTTATGTGAGGAAAAATTTCACATATCCTGCATTGAGGCAAATGGTGGCAAGACTGATGATTCCAGGGATGCATTATTTTGTGGAAACAAATGTCAAGAGTTATCTGAAAGACTTGAAATGCTTCTTGGGGTTAAACATGAAATTGAAGATGGATTTTCTTGCTCATTTATTCGGCGGTCAGATGTTGGCTGTGATGTTTCTCTGACAAAACCTCAGATGGTAGAATGTAATTCTAAGCTGGCTGTTTCATTATCGATAATGAATGAGTGTTTCATGCCATATATTGATCATAGAAGCGGGACCAATCTGCTCCGCAGTATTCTATATAATTGTGGGTCAAATTTCAAACGGCTGAACTATAGTGGGTTTATTACTGCAATTCTAGAGAGAGGTGATGAGATCATTTGTGTCGCATCTATCAGGATCCATGGGAACCGACTTGCAGAGATGCCTTTTATTGGGACCCGTTATATGTATAGGCGACAAGGAATGTGCCGTCGGCTTCTAAATGCCATTGAATCGGCACTCAGTTCTTTACATGTCGAGTTATTGGTCATACCAGCTATATCAGAACTCAGAGAAACCTGGACCTCCGTTTTTGGGTTTGAGCCACTTGAACAAACAAGCAGGCAAATAACAAAGAACATGAATCTGTTGGTATTTCCTCACGTAGATTTGTTACAGAAGAAGATATCAAAGCATGAAATTGCTAATGAAAATTTGATTCATACTGAAGTTTCCAATGATAAGATGAATCTTACTACATACAAGGTAGCAAGTCGGAACGGGGAAGACTCATCTGGTTCCGATTGTTGCCCGAAAAGTGAAAAAATCATATCTGTTGATTCTGGTTGTTGGCATCTTGAGAACTCATTGAATAAAGGACCTGACATTACTAGCAACACCGTACAGAATAGTAAATTTCAAAAAGATGTCACATTTCATGCTGCATGTCAGGCTGTTAATGTAAAATTGGTTGTGGACAACAAAAACACTGCAAACGCCGGTGAGTATGTGGCTAAGGCTTGTGGCCAAGTAGAAGATAAGAATAGGCAGTGTCTCAGTACGTCTTGTATTAACACTGAAGCTTCAGAGGGACATAATGTTGGACCACTGTTGGAGGTTACTGAAAGTTGTTTCAACGAGGTCAAAGTAACAACTGAGGTTGGTTTAAATAACAACAGTGCTGAAAAATCTGCTCCCTCCGGGGAAGAAAATACTCATATTGACTCACAAGTTGTGTTAAGGACAAGGGAATCAAAATATTCCGCTGAAAGTAATCACGATTCATCCAAGATTTCTGACGGTTGTGAAGCAGGTATCACAACCAACATCTTGAGGCACATTGAATCACAGAATACTACCACAGGTTTACCCGTCAGTGTGCCAGATGATCTCCAGACAAAAACAAATCCTGGAGATTGCCAATCTATTCTAGTATCTTCAGGTATTTGTGAGAAAATTGCAGATGCTGTCAATGAGACGAATAAAGCATCCAGGGAAGCTGATGCCGATTTTCTTTCTGCTGATATTGAAGTAACTCTTGATGATAAGCCTGGCTCTCATTCTAGACCCAATGGTCATAGTGCCCATGGCGAAGCAGGTCTCACAACCAACGTTTTGATGCACCTTGAATCACAGAATATTACCAAAGGTTTTTCTGTTAATTGTGAAAACAATTCTAGTGTTGGTGTAAATGAGAGGAATAAAGCATCCAGTGCAGCTGATGCTGATGTTCTTCCAATTGATCTTGAATTAGTTCCCAATATTAGGCCTGGGATAAAGGAGTCTTCAGAGCTAGCAGAGCCTGATTTGCAGGTTGATCAAACTGAACGGAGTAACGCTAACACTGCTTCGGGTGCGGCTCTGCACTGTACATCTGCCGGCAGTACTTCATGTGGTAGTACTGAAGGGATAGTTCTGTCAAACCAGGCAGTTGAGTAG 4779 0.425 MREGLRSRTPARKGSGGGEVARKKKRVFVKNEDLVSDEGLVSSTEKKGEVEALVSGDEVSGDGGVVQKKRVRVQNDEGLVLGDEGLVGPTKSIEKGEVDALVLGDEGLVKLTSSIEKKGDVECASDVECAGEVEALVKPTSSIEKKGGVERAGGVECAGEVEASVKPTSSIEKKGAVECAGDVECAGEVECAVRRGRDLDLNVSLSEEDVDLAENGDSSPMSRLKDGDSNVEAEADKKESEGVSGGRSRLKDGDSNVEVEADKKEIEGVSGGRLLRSRSKKGGERISYNEGNDGVFSESDGEHGGMERVQVKKEPEEFDEVLTDGNKNERVKVKMGGNSKKKLKRKRGRPLKTEIKEKDQLDDQPPRKVGRPRKTELKEGEQSPRKLGRPRKTELKEDDQSPRKLGRPRKTELKEDDKLVDQSPRKLGRPRKTELKEEDQFVDQSPRKLGRPRKTALKVEDQLVDQSPRKRGRPLMTDQQKHLTTVAHNCTGKASREDGKNVLIVTDIASENEVDDTLSRRSSGKKLKKKGVSPVRKNKLRKVLKTENDGMASPLVSNTVKAPAAAKQGQRRKEQQLVRDKIMECLSAAGWTVDHRPRNGRNYIDAVYVGLDGSTHWSVTLAYKRLKKHYEAGDGEGKLYKPGFKFTPIPEEDFNILTRVVTKSRKGSKVKCVPSGGKGGKRVDGVKRKEKKIKPGSGAGKGKSVKGKMKRKRSLHEEDNTNVTSSNRDRKRHKTQNKMRSTLLVRDATEEVDSEINGYVPYNRKRTVLAWMIDLGTILQNGKVRYTQDRLENASLEGKITGDGIHCGCCNEIITISDFGVHAGSKQSDPLKNIYTEEETSLLQCLLDSWNKQDESELKRFHFVDVAGEDPNDDTCGVCGDGGDLICCDGCPSTFHKSCLDIKKFPSGDWHCVYCCCKFCGLVSGSSNRSVVNDEFTMPALLTCHLCEEKFHISCIEANGGKTDDSRDALFCGNKCQELSERLEMLLGVKHEIEDGFSCSFIRRSDVGCDVSLTKPQMVECNSKLAVSLSIMNECFMPYIDHRSGTNLLRSILYNCGSNFKRLNYSGFITAILERGDEIICVASIRIHGNRLAEMPFIGTRYMYRRQGMCRRLLNAIESALSSLHVELLVIPAISELRETWTSVFGFEPLEQTSRQITKNMNLLVFPHVDLLQKKISKHEIANENLIHTEVSNDKMNLTTYKVASRNGEDSSGSDCCPKSEKIISVDSGCWHLENSLNKGPDITSNTVQNSKFQKDVTFHAACQAVNVKLVVDNKNTANAGEYVAKACGQVEDKNRQCLSTSCINTEASEGHNVGPLLEVTESCFNEVKVTTEVGLNNNSAEKSAPSGEENTHIDSQVVLRTRESKYSAESNHDSSKISDGCEAGITTNILRHIESQNTTTGLPVSVPDDLQTKTNPGDCQSILVSSGICEKIADAVNETNKASREADADFLSADIEVTLDDKPGSHSRPNGHSAHGEAGLTTNVLMHLESQNITKGFSVNCENNSSVGVNERNKASSAADADVLPIDLELVPNIRPGIKESSELAEPDLQVDQTERSNANTASGAALHCTSAGSTSCGSTEGIVLSNQAVE* 1593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2356 1592 ProSiteProfiles Zinc finger PHD-type profile. 873 918 IPR019787 -
Mal1g2356 1592 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1063 1133 IPR016181 -
Mal1g2356 1592 MobiDBLite consensus disorder prediction 227 271 - -
Mal1g2356 1592 MobiDBLite consensus disorder prediction 350 475 - -
Mal1g2356 1592 MobiDBLite consensus disorder prediction 296 336 - -
Mal1g2356 1592 MobiDBLite consensus disorder prediction 669 738 - -
Mal1g2356 1592 Pfam Tify domain binding domain 798 847 IPR032308 -
Mal1g2356 1592 SUPERFAMILY FYVE/PHD zinc finger 868 921 IPR011011 -
Mal1g2356 1592 MobiDBLite consensus disorder prediction 516 536 - -
Mal1g2356 1592 CDD NAT_SF 1072 1131 - -
Mal1g2356 1592 MobiDBLite consensus disorder prediction 1 24 - -
Mal1g2356 1592 CDD PHD1_AIRE 876 915 - -
Mal1g2356 1592 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 58 1503 - -
Mal1g2356 1592 MobiDBLite consensus disorder prediction 681 697 - -
Mal1g2356 1592 PANTHER PHD FINGER PROTEIN 12 58 1503 IPR042163 GO:0003714|GO:0045892
Mal1g2356 1592 SMART AT_hook_2 468 480 IPR017956 GO:0003677
Mal1g2356 1592 SMART AT_hook_2 366 378 IPR017956 GO:0003677
Mal1g2356 1592 SMART AT_hook_2 446 458 IPR017956 GO:0003677
Mal1g2356 1592 SMART AT_hook_2 402 414 IPR017956 GO:0003677
Mal1g2356 1592 SMART AT_hook_2 424 436 IPR017956 GO:0003677
Mal1g2356 1592 SMART AT_hook_2 344 356 IPR017956 GO:0003677
Mal1g2356 1592 SMART AT_hook_2 384 396 IPR017956 GO:0003677
Mal1g2356 1592 SMART PHD_3 917 977 IPR001965 -
Mal1g2356 1592 SMART PHD_3 875 916 IPR001965 -
Mal1g2356 1592 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 865 940 IPR013083 -
Mal1g2356 1592 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1016 1169 IPR000182 GO:0016407
Mal1g2356 1592 MobiDBLite consensus disorder prediction 1337 1355 - -
Mal1g2356 1592 MobiDBLite consensus disorder prediction 711 730 - -
Mal1g2356 1592 MobiDBLite consensus disorder prediction 208 475 - -
Mal1g2356 1592 MobiDBLite consensus disorder prediction 1337 1357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2356 Mal-Chr1 31448306 31459279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2356 382 1183 PHD Transcription Factor Family AT5G36670 39.784 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2356 - - mtr:MTR_1g072130 2041.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2356 1 31448306 31459279 Mal1g2356 1 31448306 31459279 ECH