Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2349 ATGGCTGAAGAGGAACAACCAAAGGATCTCAACTATATTCCAGAGGTTATATTGAAGAAGAGGAAACACAGTGAAGCATGGGCGTTGAGTAAAAAGGCGCAACTCCAGAAAAAAGGTTTCCAGCTCAGGAAGTCCAAGGACTTCATTAAAAAGCCTGAGGATTTCATTTTTGAATATCGCAACAGGGAGATTGACCTTATTAGAATGAAACGAAGGGTCAAGAGGAAACAGGGAGATGCATCTAGGCCAAGCAACAAGCCCATAATAGTCATTCGTATACAGGGGAAACAAGACATGCATCCTACAACCAGAAAGCACTTATTCAGTTTGGGATTGAGAAGAATATTCAGTGCTGTCTTTGTGAAGCCAACTGATGGAGTGATGGCCAAGCTGGCGAGAGTTGAACCATATGTTACCTATGGATACCCAAATCTTAAAAGCATAAAGGAGCTAATTTACAAGAAGGGACACGCGAAAATGGAGAAGCGAAAAGTTCCTTTGACAGACAATAACTTTATTGAGCAGGAATTAGGGAAATTTGGTATTGTGTGCATAGAAGACATGGTGCATCAAATTGACAATGTTGGTCCACACTTTAAGGAAGTTGTCCGATTTATGTGGCCCTTTGAACTGAACAAGCCAGCAGATGGATTGAAAGGATTGAAAAACCGATACAAGGATGGTGGAGATTCAGGGGACCGTGAGGATCTCATCAATGAGCTCATCAATAAAATGAATTAA 741 0.4116 MAEEEQPKDLNYIPEVILKKRKHSEAWALSKKAQLQKKGFQLRKSKDFIKKPEDFIFEYRNREIDLIRMKRRVKRKQGDASRPSNKPIIVIRIQGKQDMHPTTRKHLFSLGLRRIFSAVFVKPTDGVMAKLARVEPYVTYGYPNLKSIKELIYKKGHAKMEKRKVPLTDNNFIEQELGKFGIVCIEDMVHQIDNVGPHFKEVVRFMWPFELNKPADGLKGLKNRYKDGGDSGDREDLINELINKMN* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2349 246 CDD Ribosomal_L7_archeal_euk 88 246 IPR035808 -
Mal1g2349 246 PANTHER 60S RIBOSOMAL PROTEIN L7 4 246 IPR039699 -
Mal1g2349 246 PANTHER 60S RIBOSOMAL PROTEIN L7-1 4 246 - -
Mal1g2349 246 Pfam Ribosomal L30 N-terminal domain 13 77 IPR012988 -
Mal1g2349 246 TIGRFAM uL30_euk: 60S ribosomal protein uL30 14 246 IPR005998 GO:0000463|GO:0003735|GO:0022625
Mal1g2349 246 SUPERFAMILY Ribosomal protein L30p/L7e 89 246 IPR036919 -
Mal1g2349 246 Pfam Ribosomal protein L30p/L7e 89 138 IPR016082 -
Mal1g2349 246 Gene3D - 193 246 IPR036919 -
Mal1g2349 246 Gene3D - 88 192 IPR036919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2349 Mal-Chr1 31315116 31317009 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2349 1 246 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 53.012 3.85e-83 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2349 K02937 - gmx:100306107 371.318